Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1092 ATGGAGAGTTCCGTTGGGGGAGAGAGGAGTGAACGCGTGGCACTTTCAGAGGTGGTGGCAGATTGTGTGAAGCGGTGGTTCAGAGATGCACTGAAAGAGGCTAAGGCAGGGGACATAAACATGCAAGTGTTGGTGGGTCAGATGTACTACGGTGGTTATGGGGTTCCAAGAGATGCTCAGAAGGGAAGAGTTTGGCTGACCAAAGCATCAAGGACTAGGTCTTCGGTTTGGAAAGTAGGTGATAAGCACCCAGGTTATAATGCAAGTGACTCTGATTCGGATGAATTGAAGGAGGATTCATAA 303 0.4884 MESSVGGERSERVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYGGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1092 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
Gso1g1092 100 Gene3D Tetratricopeptide repeat domain 8 86 IPR011990 GO:0005515
Gso1g1092 100 PANTHER EXPRESSED PROTEIN 1 100 - -
Gso1g1092 100 SMART sel1 39 74 IPR006597 -
Gso1g1092 100 SUPERFAMILY HCP-like 27 70 - -
Gso1g1092 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1092 Gso-Chr1 44616508 44621208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1092 - - gmx:100527831 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2312 9 47397765 47401442 Gso1g1092 1 44616508 44621208 PCT
Gso1g1092 1 44616508 44621208 Gso9g2312 9 47397765 47401442 PCT