Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2255 ATGGGGAGTTGTGTGTCTAAGAATCATGCTAAGGATAATGATTCTGATCATGATGTGGATTTTGCTGTTGGGAATGTGAAACTTATTACCACCAAAGAAGCGTGGGACCAATCTTTGGAAGAAGCAAGGAGGGGTGGCAAAATTGTGATTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGATGATTGCGCCATATTACAGCGAGTTATCTGAGAAATACACATCTATGATGTTCTTGTTAGTTGATGTGGATGATCTAACTGACTTCAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAACTGCTGAAGAAGATTGTTGTCATTAATGATTCGCTTCCCGAATATAAGCAGTGA 420 0.4048 MGSCVSKNHAKDNDSDHDVDFAVGNVKLITTKEAWDQSLEEARRGGKIVIANFSATWCGPCKMIAPYYSELSEKYTSMMFLLVDVDDLTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELLKKIVVINDSLPEYKQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2255 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Gso9g2255 139 PRINTS Thioredoxin family signature 49 57 - -
Gso9g2255 139 PRINTS Thioredoxin family signature 57 66 - -
Gso9g2255 139 PRINTS Thioredoxin family signature 96 107 - -
Gso9g2255 139 Gene3D Glutaredoxin 1 135 - -
Gso9g2255 139 PANTHER THIOREDOXIN H9 1 136 - -
Gso9g2255 139 PANTHER THIOREDOXIN 1 136 - -
Gso9g2255 139 ProSiteProfiles Thioredoxin domain profile. 1 135 IPR013766 -
Gso9g2255 139 SUPERFAMILY Thioredoxin-like 22 127 IPR036249 -
Gso9g2255 139 Pfam Thioredoxin 29 127 IPR013766 -
Gso9g2255 139 CDD TRX_family 37 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2255 Gso-Chr9 46828105 46832275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2255 K03671 - gmx:100803572 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1752 18 49900661 49904910 Gso9g2255 9 46828105 46832275 GST
Gso9g2255 9 46828105 46832275 Gso3g0019 3 202552 205908 PCT
Gso3g0019 3 202552 205908 Gso9g2255 9 46828105 46832275 PCT