Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0019 ATGGGGAATTGTTTGCGTAAGGCTCAAGCGGATGATGATTCTGATCATAATGTGGAGTTTGCTTCTGGGAATGTGCAAGTTATTACTACCAAAGAATCTTGGGACCAAAAGTTGGAACAAGCGAGGAGGGACAGTAAAATTGTTATTGCAAATTTCAGTGCCACATGGTGTGGTCCTTGTAAGATGATTGCACCATATTATTGCGAGTTGTCCGAGAAATACCCATCTATCATGTTCTTATTAGTCGATGTGGATGAACTAGCTGACTTCAGCACTTTATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGAAAAGAGGTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAGAAGAAGATTGTTGTGATTAATGATGCAGTGCCTCATAAGCAATAG 414 0.4106 MGNCLRKAQADDDSDHNVEFASGNVQVITTKESWDQKLEQARRDSKIVIANFSATWCGPCKMIAPYYCELSEKYPSIMFLLVDVDELADFSTLWDIKATPTFFFLKDGKEVDKLVGANKPELEKKIVVINDAVPHKQ* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0019 137 Gene3D Glutaredoxin 2 133 - -
Gso3g0019 137 PANTHER THIOREDOXIN H9 6 135 - -
Gso3g0019 137 Pfam Thioredoxin 27 126 IPR013766 -
Gso3g0019 137 ProSiteProfiles Thioredoxin domain profile. 4 131 IPR013766 -
Gso3g0019 137 CDD TRX_family 32 126 - -
Gso3g0019 137 ProSitePatterns Thioredoxin family active site. 49 67 IPR017937 -
Gso3g0019 137 PRINTS Thioredoxin family signature 48 56 - -
Gso3g0019 137 PRINTS Thioredoxin family signature 56 65 - -
Gso3g0019 137 PRINTS Thioredoxin family signature 95 106 - -
Gso3g0019 137 PANTHER THIOREDOXIN 6 135 - -
Gso3g0019 137 SUPERFAMILY Thioredoxin-like 20 126 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0019 Gso-Chr3 202552 205908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0019 K03671 - gmx:100527258 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1752 18 49900661 49904910 Gso3g0019 3 202552 205908 PCT
Gso9g2255 9 46828105 46832275 Gso3g0019 3 202552 205908 PCT
Gso3g0019 3 202552 205908 Gso18g1752 18 49900661 49904910 PCT
Gso3g0019 3 202552 205908 Gso9g2255 9 46828105 46832275 PCT