Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2165 ATGTGCAAGGTTGTGCGATTCGCGGCGGCGGCCAGATTGCGGCGATTATCGACGGCGATTCCCGGTCCATGCAAGGTTCAAAAGCGTGGCACTGATATCCTCCACGATCCTTGGTTCAACAAGGATACTGGGTTTCCTTTAACTGAAAGGGATCGATTGGGGCTTCGGGGCCTCCTTCCTCCTCGTGTCATTTCATTTGAGCATCAATATGATCGGTTTATGAATTCATACAGATCTTTGGAGAAGAATACACGGGGCCAATCAGATAAGTTTGTTTCTTTATCCAAATGGAGGATCTTAAATAGATTGCATGACAGGAATGAGATTCTATATTACAGAGTTCTTATTGATAACATCAAAGAGTTTGCTCCAATAATCTATACCCCCACAGTTGGGTTAGTGTGTGAAAATTATTCAGGGTTATTTAGACGCCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCATCTGATCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCTTGGGTGACCTTGGAGTTCAGGGCATTGGAATACCTATAGGAAAACTTGACATGTATGTTGCTGCTGCTGGTATCAATCCACGAAAAATACTTCCAGTTATGTTAGATGTTGGCACAAACAATCAAAAGCTACTCGAAGATCCCCTTTATTTAGGAGTTCGACAACCTAGGTGGGAAGGTGAAGCGTATCTATCAATTGTGGATGAATTCATGGAAGCTGTACACACTCGATGGCCTAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATCGAGAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACAGCTGGTGTTGCACTTGCTGGACTATTGGGAACTGTAAGGTCCCAAGGTCGACCATTGTCTGATTTTTTGAAGCAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAGCATGGCTGTCCAAGCTGTTTCTAGGATGTCAGGGGGCAGTGAAACAGCTGCCAACAGTCAATTTTTTTTAATTGATAAAGATGGTCTTGTCACAACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTCCATTTGCCAAAAATCCAAGAGATCTTGAAGGGCTTTCAGAGGGCGCTAGTGTAATTGAAGTGGTTAAGAAGGTTAAGCCACATGTGCTCCTTGGATTGTCTGGAGTTGGTGGTGTTTTCAATGCAGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCAATGTCTAATCCCACCATGAATGCTGAGTGCACTGCTATTGAAGCTTTCAGTCATGCTGGAGAAAATATAGTGTTTGCAAGTGGAAGCCCTTTTGAAAATGTAGATCTTGGAAATGGAGAAGTTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTCCCAGGGATTGGTTTGGGAACACTTCTGTCAGGTGCTCGTCATATAACGGATGGAATGTTGCGAGCAGCAGCTGAATGCCTTGCTTCATACATGACAGATGAGGATGTCCAAAAGGGAATCTTGTACCCATCCATTGACTGTATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTACATGCAGCGGTTGCAGAAAAGCAGGCTGAAGGACATGGTGATGTAGGGTTCAAAGAGCTAGCAAACATGTCAAAAGAAGAAACCGTGGAGTATGTCCGAGGCAATATGTGGTACCCTGAGTATTGCCCTCTTGTTCATGAAAAATAG 1806 0.4369 MCKVVRFAAAARLRRLSTAIPGPCKVQKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYDRFMNSYRSLEKNTRGQSDKFVSLSKWRILNRLHDRNEILYYRVLIDNIKEFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPSDQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPRKILPVMLDVGTNNQKLLEDPLYLGVRQPRWEGEAYLSIVDEFMEAVHTRWPKAIVQFEDFQMKWAFETLKRYRERFCMFNDDIQGTAGVALAGLLGTVRSQGRPLSDFLKQKIVVVGAGSAGLGVLSMAVQAVSRMSGGSETAANSQFFLIDKDGLVTTERSNLDPAAVPFAKNPRDLEGLSEGASVIEVVKKVKPHVLLGLSGVGGVFNAEVLKAMRESVSTKPAIFAMSNPTMNAECTAIEAFSHAGENIVFASGSPFENVDLGNGEVGHVNQANNMYLFPGIGLGTLLSGARHITDGMLRAAAECLASYMTDEDVQKGILYPSIDCIRDVTAEVGAAVVHAAVAEKQAEGHGDVGFKELANMSKEETVEYVRGNMWYPEYCPLVHEK* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2165 601 Pfam Malic enzyme, NAD binding domain 294 556 IPR012302 GO:0051287
Gso9g2165 601 SMART malic_2 104 284 IPR012301 GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 598 IPR036291 -
Gso9g2165 601 PIRSF ME 7 600 IPR001891 GO:0004470|GO:0004471
Gso9g2165 601 Pfam Malic enzyme, N-terminal domain 104 284 IPR012301 GO:0004471
Gso9g2165 601 Gene3D - 28 291 IPR037062 GO:0004471
Gso9g2165 601 PANTHER MALIC ENZYME 9 597 - -
Gso9g2165 601 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Gso9g2165 601 Gene3D - 292 601 - -
Gso9g2165 601 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 16 293 IPR046346 -
Gso9g2165 601 SMART Malic_M_2 294 557 IPR012302 GO:0051287
Gso9g2165 601 PANTHER MALIC ENZYME-RELATED 9 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2165 Gso-Chr9 45924140 45931875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2165 K00028 - gmx:100775394 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1996 18 52541182 52549129 Gso9g2165 9 45924140 45931875 GST
Gso9g2165 9 45924140 45931875 Gso7g0651 7 6930474 6938318 PCT
Gso9g2165 9 45924140 45931875 Gso3g0120 3 1441124 1448879 PCT
Gso7g0651 7 6930474 6938318 Gso9g2165 9 45924140 45931875 PCT
Gso3g0120 3 1441124 1448879 Gso9g2165 9 45924140 45931875 PCT