Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2140 ATGTCTAACACCAAATCTCATGCTGGCATTCCCATTTTGGACCTTTCTCAGCCATTGCAGCCATGTTCTCTATCCTCTCTCTATAATGCAAGCAAAGATTGGGGTCTTTTCCACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCAGATCCAGACACTATCCAAACACCTCTTCAACCTCCCTTCTAATACTAAACTTAGACTTGGTCCTTTGTCATCTTTAAATTCTTACACCCCTCTTTTCATTGCCTCTCCATTCTTTGAGAGCCTCCGAGTCAATGGACCCAACTTTTATGTTTCTGCTGATAATTCTGCTGAGATCCTCTTTGACAAAAAGGACTCCAAATTCAGTGTGATAATACAAGAATATTGCAGTAAGATGGAAGATTTGTCTAAGAAAATTCTAAAGCTTGTATTGATGAGCATAGGGGATGGCATTGAGAAGAAGTTCTATGATTCTGAGTTCAAGAAGTGCCACGGTTACTTGAGGGTAAACAATTACTCAGCTCCAGAAGTTATAGAAGATCAAGTTGAGGGGCTTGGGATGCACACTGATATGAGTTGTATTACTATCTTATATCAAGATGAGATAGGAGGGCTTCAAGTGAGATCAAATGAGGGAGAGTGGATAGATATAAACCCATCTGAGGGAACCCTAGTGGTGAACATAGGTGATATGTTGCAAGCTTGGAGCAATGACAAACTAAGATCCTCAGAACATAGAGTTGTTTTGAAACATCATGAGAACCGGTTTTCTCTATCATTCTTTTGGTGCTTTGAGGATGACAAGGTGATTTTGGCACCAGATGAAGTTGTTGGAGAAGGGAATAAAAGGAAGTACAAACCATTTGTGTGCTTGGACTATTTGAAATTTAGAGAGAGCAATGAAAGAGGTAGATTTGATAAGGTGGGTTTCACAGTTAGAGACTTTGCTTCGATCAAGGCTCAGTTGTAA 960 0.399 MSNTKSHAGIPILDLSQPLQPCSLSSLYNASKDWGLFHIINHGISKDLCSQIQTLSKHLFNLPSNTKLRLGPLSSLNSYTPLFIASPFFESLRVNGPNFYVSADNSAEILFDKKDSKFSVIIQEYCSKMEDLSKKILKLVLMSIGDGIEKKFYDSEFKKCHGYLRVNNYSAPEVIEDQVEGLGMHTDMSCITILYQDEIGGLQVRSNEGEWIDINPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHHENRFSLSFFWCFEDDKVILAPDEVVGEGNKRKYKPFVCLDYLKFRESNERGRFDKVGFTVRDFASIKAQL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2140 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 312 - -
Gso9g2140 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Gso9g2140 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 262 IPR005123 -
Gso9g2140 319 SUPERFAMILY Clavaminate synthase-like 6 297 - -
Gso9g2140 319 Gene3D - 1 293 IPR027443 -
Gso9g2140 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 312 - -
Gso9g2140 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 73 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2140 Gso-Chr9 45706986 45708580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2140 10 290 Glycosyltransferase AT5G59530 27.797 3.96e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2140 - - gmx:100812108 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2140 9 45706986 45708580 Gso3g0085 3 946097 947734 PCT
Gso3g0085 3 946097 947734 Gso9g2140 9 45706986 45708580 PCT