Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0085 ATGTCTATGTCTGAATATGTTGTTGAGCTTCCTATTTTGGACATTTCTCAGCCATTACAGCCATCTTCTCTAACCTCTCTCTCTAAAGCCTGCAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAGCCAGATCCACTACTTATCCAAATACCTTTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCCTCTATAAAGTCTTACACCCCTCACTTCATTGCTTCTCCATTCTTTGAGAGCCTCAGAATTAATGGACCAAACTTCTATGCTTCTGCTAAGAGTTCTGAAGACATCCTCTTTGACAAACAGACTTCCAAATTCAGTGAGACACTGCAAGAATATTGTAGTAAGATGGTTGATTTGTCAGAGAGGATTCTAAAGCTTGTATTGATGAGCTTAGAGGATGGATTTGAGAAGCTGTTCTATGATTCTGAATTCAACAAGTGCCATGGTTACTTGAGGATAAACAACTATTCTGCTCCAGAAAGTTTTGAGGACCAAGTTGAGGGGCTTGGAATGCACACTGACATGAGTTGTATCACTATCTTATATCAAGATGAAATAGGAGGGCTTCAAGTGAGATCACATGAAGGAAAGTGGATAGACATAAGCCCTTCTGAGGGTACCCTAGTGGTGAACATAGGGGACATGATGCAAGCTTGGAGCAATGATAAATTAAGGTCTTCTGAACATAGAGTTGTTTTGAAGCAGTCTGTGAGCAGGTTCTCCTTGGCTTTCTTTTGGTGCTTTGAGGATGAGAAGGTGGTGTTGGCACCTGATGAAGTTGTTGGAGATGGAAACAAGAGGCTGTACAATCCATTTGTGTGCTCAGAATACTTGAAATTCAGAGAGAACAATCAAAGAGGAAGGTTTGAAAAAGTGGGGTACACAGTTAAGGATTTTGCTGGGATTAAGTCTAATCTGTAA 960 0.4052 MSMSEYVVELPILDISQPLQPSSLTSLSKACKDWGFFHIINHGISKDLCSQIHYLSKYLFSLPSEAKLKLGPFSSIKSYTPHFIASPFFESLRINGPNFYASAKSSEDILFDKQTSKFSETLQEYCSKMVDLSERILKLVLMSLEDGFEKLFYDSEFNKCHGYLRINNYSAPESFEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQSVSRFSLAFFWCFEDEKVVLAPDEVVGDGNKRLYNPFVCSEYLKFRENNQRGRFEKVGYTVKDFAGIKSNL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0085 319 Gene3D - 2 293 IPR027443 -
Gso3g0085 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 312 - -
Gso3g0085 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 312 - -
Gso3g0085 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 259 IPR044861 -
Gso3g0085 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 262 IPR005123 -
Gso3g0085 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Gso3g0085 319 SUPERFAMILY Clavaminate synthase-like 7 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0085 Gso-Chr3 946097 947734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0085 8 290 Glycosyltransferase AT5G59530 30.405 3.05e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0085 - - gmx:100782766 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2140 9 45706986 45708580 Gso3g0085 3 946097 947734 PCT
Gso3g0085 3 946097 947734 Gso9g2140 9 45706986 45708580 PCT