Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2122 ATGGAGACACCATTAATGTTCAACAGTGATCTCAATTCCACGGGGACCACAGAGCTCCAATATGCTCCTGAGGGTCTAGTTGACACAAATGGAGGAGACTACACTGAAATGAGTGGCCTTGCAGATTTCAAAAATGTGTTCTCTGTGGAATCCGTAAAGCTCTGGACAATTGCTGCACCCATTGCCTTCAGCATACTATGCAATTATGCTGTCAATTCCTTCACAACTATCTTTGTAGGCCATCTTGGAGATTTAGAACTCTCTTCAGTTTCACTCTCTCTCTCTGTCGTTTCAAATTTCTCTTTTGGCTTCTTGCTTGGTATGGCAAGTGCACTAGAGACTTTATGTGGGCAAGCATTTGGTGCTGGACAAGTAGAAATGTTAGGGGTCTACATGCAACGTTCTTGGTTAATCTTATTGGGTGCATGCATCTGCCTCACACCAATTTACATTTATGCTGAGCCAATCTTGTTACTCCTTGGACAAGAACCTGAAATTGCAGAGTTAGCTGGTGTATTTACCATTCAATCCATCCCTCAGATGTTTTCTCTAGCCATCAATTTCCCCACCCAGAAGTTCTTGCAGGCACAAACCAAAGTGGGATTTCTTGCATGGGTTGGTTTTGGAGCCTTTATTTTTCACATTATACTTCTATGGATTTTACTTAAAGTGCTTGCATTGGGTACAACTGGTGCTGCTGTAGCCTATAGCACAACAGCTTGGGTTATTGCTTTGGCTCAAACAGCTTATGTGATTGGTTGGTGCAAAGATGGGTGGAGAGGCTTCTCGTGGTTGGCATTCAAGGATCTTTGGGCCTTTGTGAAATTGTCTGTTGCTTCAGCAGTCATGCTATGCTTAGAGGTTTGGTATTTTATGATCTTAATTGTGCTCACTGGACACCTTGACAATGCAGTTATTGCTGTTGGTTCTCTTTCAATATGCATGACTATCAATGGATTTGAAGGCATGTTATTTATAGGGATCAATGCAGCAATTAGTGTGAGGGTTTCCAATGAGCTTGGATCAGGACACCCAAGAGCGGCAAAATATTCAGTCATTGTCACAATTATTGAGTCCCTCGTCATTGGGTTAATTTGTGCAGCCATTATTTTAATAACAAAAGATCATTTTGCCATCATTTTCACTGAGAGTAAAGAGATGATAAAAGCAGTTTCTAAATTAGCAGGCCTTCTTGGGTTAACCATGATTCTGAATAGTGTTCAGCCAGTTATATCAGGTGTTGCTGTGGGAGGAGGGTGGCAGGCTTTGGTGGCTTACATCAATCTATTTTGTTATTACATCATGGGACTCCCTCTTGGCTTCCTTTTGGGTTACAAGTTGGGTTACAGAGTGGAGGGTATTTGGGTTGGAATGATTTGTGGGACAATATTGCAAACGCTCATCTTGTTGTACATTGTCTATAAAACAAACTGGAACAAGGAGGTTGAGCTAGCATCAAGTCGAATGCGGAAATGGACCGGACAAGAAATTGAAATTAATTTGGCAAATTCTCAGCAACCAGTCACACATTAA 1533 0.4162 METPLMFNSDLNSTGTTELQYAPEGLVDTNGGDYTEMSGLADFKNVFSVESVKLWTIAAPIAFSILCNYAVNSFTTIFVGHLGDLELSSVSLSLSVVSNFSFGFLLGMASALETLCGQAFGAGQVEMLGVYMQRSWLILLGACICLTPIYIYAEPILLLLGQEPEIAELAGVFTIQSIPQMFSLAINFPTQKFLQAQTKVGFLAWVGFGAFIFHIILLWILLKVLALGTTGAAVAYSTTAWVIALAQTAYVIGWCKDGWRGFSWLAFKDLWAFVKLSVASAVMLCLEVWYFMILIVLTGHLDNAVIAVGSLSICMTINGFEGMLFIGINAAISVRVSNELGSGHPRAAKYSVIVTIIESLVIGLICAAIILITKDHFAIIFTESKEMIKAVSKLAGLLGLTMILNSVQPVISGVAVGGGWQALVAYINLFCYYIMGLPLGFLLGYKLGYRVEGIWVGMICGTILQTLILLYIVYKTNWNKEVELASSRMRKWTGQEIEINLANSQQPVTH* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2122 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 491 - -
Gso9g2122 510 TIGRFAM matE: MATE efflux family protein 60 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2122 510 CDD MATE_eukaryotic 50 483 IPR045069 GO:0042910|GO:1990961
Gso9g2122 510 Pfam MatE 60 220 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2122 510 Pfam MatE 280 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2122 510 PANTHER PROTEIN DETOXIFICATION 22 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2122 Gso-Chr9 45510595 45523289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2122 K03327 - gmx:100780024 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2122 9 45510595 45523289 Gso9g2122 9 45510595 45523289 ECH
Gso18g1954 18 52037849 52041768 Gso9g2122 9 45510595 45523289 GST