Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1954 ATGTTCAACAATGGTTTCAATTCCATGGAGACCACAGAGCTCCACCATGCTCCTGAGGGTCTTGTTGACACAAATGGAGGAGACTACACTGAAATGAGTGGCTTTGCAGATTTCAAAAACGTGTTCTCTGTGGAATCTATAAAGCTTTGGACAATTGCTGCTCCCATTGCCTTCAGCATACTATGCAATTATGCTGTCAATTCCTTCACGACTATCTTTGTTGGTCATCTTGGAGATTTAGAACTCTCTTCAGTTTCACTCTCTCTCTCTGTCGTTTCAAATTTCTCTTTTGGCTTCTTGCTTGGTATGGCAAGTGCACTAGAGACTTTATGTGGGCAAGCATTTGGTGCTGGACAAGTAGAAATGATAGGGGTCTACATGCAACGTTCTTGGTTAATCTTATTGGGTGCATGCATCTGCCTCACACCAATTTACATTTATGCTGAGCCAATCTTGCTACTCCTAGGACAAGAACCCGAAATTGCAGAATTAGCTGGGGCATTTACCATTCAATCCATCCCTCAGATGTTTTCTCTAGCCATCAATTTCCCCACTCAAAAGTTCTTGCAGGCACAAACCAAAGTGGGGTTTCTGGCATGGCTTGGTTTTGGAGCATTTATTTTTCATGTTATACTTCTATGGATTTTACTTAAAGTGTTTTCATTGGGTACAACTGGTGCTGCTGTAGCCTATTGCACAACAGCTTGGATTATTGCTTTGGCTCAAACGGCTTATGTGATTGGTTGGTGCAAGGATGGGTGGAGAGGCTTCTCATGGTTAGCATTCAAAGATCTTTGGGCCTTTGTGAAATTGTCTGTTGCTTCAGCAGTCATGCTTTGCCTAGAGATTTGGTATTTCATGATCTTGATTGTGCTCACTGGACACCTTGACAATGCAGTTATTGCTGTTGGTTCTCTTTCAATATGCATGACTATCAATGGATTTGAAGGCATGTTATTTATAGGGATCAATGCAGCAATTAGTGTGAGGGTTTCAAATGAGCTTGGATCAGGACGCCCAAGAGCAGCAAAATATTCAGTCATTGTCACAATTATTGAGTCCCTCATCATTGGGTTAATTAGTGCAGCCATTATTTTAGCTACAAAAGATCATTTTGCCATCATTTTCACTGAGAGTAAAGAGATGATAAAAGCAGTTTCTAAATTAGCAGGTCTTCTTGGCATAACCATGATTCTGAATAGTGTTCAGCCAGTTATATCAGGTGTTGCTGTAGGAGGAGGGTGGCAAGCTTTGGTAGCTTACATCAATCTATTTTGCTATTACATCATGGGGCTCCCTCTTGGCTTCCTTTTAGGTTACAAGTTGGGTTACAGAGTGGAGGGTATTTGGGTTGGAATGATCTGTGGGACAATGTTGCAAACGCTCATCTTGTTGTACATTGTCTATAAAACAAACTGGAACAAGGAGGTTGAGCAAGCATCAGAACGAATGCGGAAATGGACCGGACAAGAAATTGAAATTAATTTGGCAAATTCTCAGCAAACATTCACTCGGTGA 1518 0.4137 MFNNGFNSMETTELHHAPEGLVDTNGGDYTEMSGFADFKNVFSVESIKLWTIAAPIAFSILCNYAVNSFTTIFVGHLGDLELSSVSLSLSVVSNFSFGFLLGMASALETLCGQAFGAGQVEMIGVYMQRSWLILLGACICLTPIYIYAEPILLLLGQEPEIAELAGAFTIQSIPQMFSLAINFPTQKFLQAQTKVGFLAWLGFGAFIFHVILLWILLKVFSLGTTGAAVAYCTTAWIIALAQTAYVIGWCKDGWRGFSWLAFKDLWAFVKLSVASAVMLCLEIWYFMILIVLTGHLDNAVIAVGSLSICMTINGFEGMLFIGINAAISVRVSNELGSGRPRAAKYSVIVTIIESLIIGLISAAIILATKDHFAIIFTESKEMIKAVSKLAGLLGITMILNSVQPVISGVAVGGGWQALVAYINLFCYYIMGLPLGFLLGYKLGYRVEGIWVGMICGTMLQTLILLYIVYKTNWNKEVEQASERMRKWTGQEIEINLANSQQTFTR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1954 505 Pfam MatE 275 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso18g1954 505 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso18g1954 505 TIGRFAM matE: MATE efflux family protein 55 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso18g1954 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 486 - -
Gso18g1954 505 PANTHER PROTEIN DETOXIFICATION 17 486 - -
Gso18g1954 505 Coils Coil 470 490 - -
Gso18g1954 505 CDD MATE_eukaryotic 45 479 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1954 Gso-Chr18 52037849 52041768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1954 K03327 - gmx:100786991 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1954 18 52037849 52041768 Gso9g2122 9 45510595 45523289 GST