Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1804 ATGAGTCCAAAGGTGGTTTTTACAGTGGGGGACCCAGCCAGCGATCACTCTCTCATTCTCCGACACCCGGAAGCTCCAAACGACGCCGTGTGTTGCTGTTGCAGCATTCTTTCAGTCTCTTCTTCTTCTTCTTCTTCTCATACATTCAAAGGTGGAGCAGTTGAAGAAGCTGGTGGGGAGGGAGCAATGGGGTCCAATAATCATGGCAACTCGAAGGAGTTTCTAGAACTCATAAAGTCCATCGGCGAGTCCCGATCCAAGGCCGAGGAGGACTGCATCGTCCTCCGCGAGATCGAAACCCTAAAACGCCGCATCAACGACGCCGACACTCCGAAACGCAAGATCAAGGAGTACATCATCCGCCTCCTCTATGTCGAGATGCTCGGCCACGACGCCTCCTTCGGATACATCCACGCCGTCAAGATGACTCACCACGACTCCCTCCTCCTGAAGCGCACCGGCTACCTCGCCCTCACGCTCTTCCTCAGCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAAGACCTCGCCTCCGATAACTACCTCGTCGTTTGCGCCGCTCTTAACGCCGTCTGCAGGCTCATCAACGAGGAGACCATCCCCGCCGTGCTTCCTCGTGTCGTCGAGCTTCTTCACCACTCCAAGGACGCCGTTAGGAAGAAGGCCGTTATGGCGCTGCACCGCTTCTACCTCAAATCTCCGTCCTCCGTTTCGCATTTGCTTTCTAATTTCCGTAAGCGGTTGTTCGATAACGATCCTGGTGTAATGGGCGCTTCTCTTTGCCCGCTTTCTAATATCGTTTCCGATGATGTTAACTCTTTTAAGGACCTTGTCGTTAGCTTTGTTAATATTCTCAAGCAAGTCGCAGAACATAGGTTGCCCAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGTTGCTGAAAATACTTGCGTTACTGGGAAGTGGCGACAAGCAAGCTAGTGGACACATGTACACTGTGCTTGGTGATATAATCAGGAGGAGTGATTCGATGACCAACATAGGGAATGCTGTTCTCTATCAGTGCATATGCTGTGTTGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCTGCGGATGTAATCGCAAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAGCACCAACTTGCCGTCATTGACTGCTTGGAGGACCCAGATGATAGTCTGAAACGAAAAACTTTTGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATGAGTGATGACCATTATAAAACTTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATTATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGATGATGATGCTGCAGACAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATAGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATATGGAACAGTAGATGGAAAGTATTCTGCTTCCTATATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCCAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGCATTTGAAGTAGCAGCCGGGAGGAAAGTGGATATCCTATCTGAGTGCCAATCGTTGATTGAAGAATTATTGGCATCCCACTCTTCAGATCTGCAGCAACGTGCTTATGAATTGCAAGCCTTTATAGGTTTGGATGTACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTCTTTCCTCAATGGGTATGTTCAGCAGTCTTTAGAAAGAGGTGCTGAATCCTATATTCCTGAGGATGTGCGTGCTGGAATGGGGAATATGAAAAATTTCAGAAGCCAAGATCATCATGAAACTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGCCTCCAATGCAACCGAAAGTTACTCCAGTTTCATTTGCATCTTCAGCAGACATTGTTCCAGTGCCCGAGGTATTGTCTTCCAGGGAGACCCACCATATCTCGTCAGTGGGATCAACTTCTGAGGTTGGATCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAACCAACGTATTCATCTTCAACATCATCTGCCTCTGCCTCGTATTCTACTTCCCAAAAACCAACGAGTGGGGCAACTCTGGTGGATGGTGCTACAACTGTCAATTCAAAAGTGCATGATACTTATGATTCAAGAAAGACACAGGTTGAGATTACTCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGTCACAAGGTTTCAAAATCTAGTGCAAGTGCTGCAGACGGATCTCGGGGATCAAAGGCTGCGGTTGTACCCAATGAAGTAGCTGTGGAAAAAGCAATTCATCAACCACCTCCTGCTGATTTGCTTGACTTGGATGAACCAACTGTCACTACGGCTCCTCCTTCTGTGGACCCATTCAAGGAATTGGAAGGACTTCTTGACCCAAGCACTAATTCTGCAACAAATCATAATGTAGCTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCCGAGACTACTGTCAGTGGTGGCGACTCTATACCCGTGAGTGGGGGGTATGATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTACAAAAGCTACTCGTGAAGAAACAATTGTGAAGCCGTTGCCACAATCTATTAAGGGTCCAGATGCTAAAGATTCTTTGGAGAAGGATGCTTTAGTGAGGCAGATGGGTGTGAAGCCCTCAAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 3090 0.4524 MSPKVVFTVGDPASDHSLILRHPEAPNDAVCCCCSILSVSSSSSSSHTFKGGAVEEAGGEGAMGSNNHGNSKEFLELIKSIGESRSKAEEDCIVLREIETLKRRINDADTPKRKIKEYIIRLLYVEMLGHDASFGYIHAVKMTHHDSLLLKRTGYLALTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVELLHHSKDAVRKKAVMALHRFYLKSPSSVSHLLSNFRKRLFDNDPGVMGASLCPLSNIVSDDVNSFKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLGDIIRRSDSMTNIGNAVLYQCICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISMSDDHYKTYIASRCVELAEQFAPSNYWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTVDGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAAGRKVDILSECQSLIEELLASHSSDLQQRAYELQAFIGLDVQAVETIMPRDASCEDIEVDKNLSFLNGYVQQSLERGAESYIPEDVRAGMGNMKNFRSQDHHETLQHGLRFEAYEVPKPPMQPKVTPVSFASSADIVPVPEVLSSRETHHISSVGSTSEVGSSELKLRLDGVQKKWGKPTYSSSTSSASASYSTSQKPTSGATLVDGATTVNSKVHDTYDSRKTQVEITPEKQKLAASLFGGSTKPEKRSSTSHKVSKSSASAADGSRGSKAAVVPNEVAVEKAIHQPPPADLLDLDEPTVTTAPPSVDPFKELEGLLDPSTNSATNHNVAAATNAPDIMSLYAETTVSGGDSIPVSGGYDVNLLSELSNAATKATREETIVKPLPQSIKGPDAKDSLEKDALVRQMGVKPSSQNPNLFSDLLG* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1804 1029 MobiDBLite consensus disorder prediction 781 810 - -
Gso9g1804 1029 Pfam Adaptin N terminal region 103 642 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gso9g1804 1029 Gene3D - 60 655 IPR011989 -
Gso9g1804 1029 MobiDBLite consensus disorder prediction 782 810 - -
Gso9g1804 1029 SUPERFAMILY ARM repeat 89 680 IPR016024 -
Gso9g1804 1029 PIRSF AP4_epsilon 62 893 IPR017109 GO:0015031|GO:0030124
Gso9g1804 1029 PIRSF AP4_epsilon 919 1029 IPR017109 GO:0015031|GO:0030124
Gso9g1804 1029 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 66 1025 - -
Gso9g1804 1029 MobiDBLite consensus disorder prediction 842 876 - -
Gso9g1804 1029 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 66 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1804 Gso-Chr9 42520765 42529415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1804 K12400 - gmx:100780202 1895.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1306 1 49553928 49562470 Gso9g1804 9 42520765 42529415 GST