Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1306 CACCGGGAAGCTCAAAACGACGCCGTGTGTGTTGCTGTTGCAGGCTTCTTCTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTCACACATTGTTCCTTTCCTTCCATCAATCAAAGGTGGAGCAGCTGAAGACGCTGGTGGGGAGGGAGCTGACAATGGGCTCTCACCATGGCCACTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGTGAGATCGAAACCCTAAAACGCCTCCTCAACGACGCCGACACACCAAAACGCAAGATCAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCGTCGTTCGGCTACATCCACGCCGTGAAGATGACTCACCACGACGCCCTCCTCCTCAAACGCACCGGCTACCTCGCCGTCACGCTCTTCCTCAGCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAGGATCTTGCCTCCGATAACTACCTCGTCGTTTGCGCCGCGCTTAACGCCGTTTGTAGACTCATCAACGAGGAGACCATCCCCGCCGTGCTGCCACGTGTTGTGGATCTGCTTAACCACTCCAAGGACGCCGTTAGGAAGAAGGCCGTTATGTCGCTGCACCGGTTTTACCTGAAATCTCCGTCCTCCGTTTCGCATTTGCTTTCCAATTTCCGTAAGCGGTTGTGCGATAATGATCCCGGAGTAATGGGCGCTTCTCTGTGCCCGCTTTTTAATCTCGTTTCCGATGATGTTCACTCTTATAAGGACCTTGTCGTTAGCTTTGTTAATATTCTTAAGCAAGTTGCAGAGCATAGGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCTAGTGGACACATGTACACTGTGCTTGAGGATATAATTAGGAGGAGTGATTCAATGACGAACATAGGGAATGCTGTTCTCTATCAGTGCATATGCTGTGTGGCTTCTATATATCCCAATCCTAAGTTGTTAGAGGCTGCTGCGGATGTAATTGCGAAATTTTTGAAGAGTGACAGTCATAATCTGAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTGGAGGACCCAGATGATAGTCTGAAACGAAAAACTTTCGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACTTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGACGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGCCGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATACGGAACAGCAGATGGAAAGTATTCTGCTTCTTATATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCCAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCACTGTTGAAAATTTATGCATTTGAAGTAGCAGCTGGGAGGAAAGTGGATATCCTATCTGAGTGCCAATCGTTGATTGAAGAATCATTGGCATCACACTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCTCTTATAGGTTTGGATGTACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTCTTTCCTCAATGGGTATGTTCAGCAGTCTTTAGAAAGGGGTGCTAAATCCTATATTCCTGAGGATGTGCGCACTGGAATGGGGAATATGAACAATTTCAGAAGCCAAGATCATCATGAAACTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCGAAGGCTCCAATGCAACCAAAAGTTACTCCAGTTTCATTTGCATCCTCAGCAGACATTGTTCCAGTACCCGAGGTTTTGTCTTCCAGGGAGACCCACCATATCTCATCAGTGGGATCAACATCTGAGGCTGGATCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAATGGGGTAAACCAATGTATTCGTCTTCAACATCATCTGCCTCTGTCTCGTATTCTACTTCCCAAAAACCAACGAATGGGGCAACTCAGGTGGATGGTGCTACAACTGTCAATTCAAAAGTGCGTGATAGTTATGATTCAAGAAAGACACAGGTTGAGATTACTCCAGAAAAGCAAAAGCTTGCTGCTTCTTTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGTCATAAGGTTTCAAAATCTAGTGCTAGTGCTGCAGACGGATCTCAGGGATCAAAGGCTGCGGTTGTACCCAATGACGTAGCTGTGGAAAAAACAATTCATCAACCACCTCCTCCTGATTTGCTTGACTTGGGTGAGCCAACTGTCACTACAGCTCCTCCTTATGTGGACCCATTCAAGGAATTGGAAGGACTTCTTGACCCAAGCACTAAGTCTGCAACAAATCATAATGTAGCTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCCGAGACTACTGCCAGTGGTGGTTATTCTATACCCGTGAGTGGGGGGTATGATGTAAATCTTTTATCTGAATTGTCAAATGCAGCAGCAAAAGCTACTAGTGGAGAAACAATTGTGACGTCTTTGCCACAATCTATTATGGGTCGAAATGCTAAAGATTCTTTGGAGAAGGATGCTTTAGTGAGGCAGATGGGTGTGAATCCCTCGAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 3054 0.4525 HREAQNDAVCVAVAGFFSLSSSSSSSSHTLFLSFHQSKVEQLKTLVGRELTMGSHHGHSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRLLNDADTPKRKIKEYIIRLLYVEMLGHDASFGYIHAVKMTHHDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHSKDAVRKKAVMSLHRFYLKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDVHSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLEDIIRRSDSMTNIGNAVLYQCICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAAESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALLKIYAFEVAAGRKVDILSECQSLIEESLASHSTDLQQRAYELQALIGLDVQAVETIMPRDASCEDIEVDKNLSFLNGYVQQSLERGAKSYIPEDVRTGMGNMNNFRSQDHHETLQHGLRFEAYEVPKAPMQPKVTPVSFASSADIVPVPEVLSSRETHHISSVGSTSEAGSSELKLRLDGVQKKWGKPMYSSSTSSASVSYSTSQKPTNGATQVDGATTVNSKVRDSYDSRKTQVEITPEKQKLAASLFGGSTKPEKRSSTSHKVSKSSASAADGSQGSKAAVVPNDVAVEKTIHQPPPPDLLDLGEPTVTTAPPYVDPFKELEGLLDPSTKSATNHNVAAATNAPDIMSLYAETTASGGYSIPVSGGYDVNLLSELSNAAAKATSGETIVTSLPQSIMGRNAKDSLEKDALVRQMGVNPSSQNPNLFSDLLG* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1306 1017 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 53 1013 - -
Gso1g1306 1017 SUPERFAMILY ARM repeat 76 674 IPR016024 -
Gso1g1306 1017 MobiDBLite consensus disorder prediction 739 758 - -
Gso1g1306 1017 PIRSF AP4_epsilon 737 879 IPR017109 GO:0015031|GO:0030124
Gso1g1306 1017 PIRSF AP4_epsilon 931 1017 IPR017109 GO:0015031|GO:0030124
Gso1g1306 1017 PIRSF AP4_epsilon 50 729 IPR017109 GO:0015031|GO:0030124
Gso1g1306 1017 Pfam Adaptin N terminal region 87 630 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gso1g1306 1017 Gene3D - 48 643 IPR011989 -
Gso1g1306 1017 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 53 1013 - -
Gso1g1306 1017 MobiDBLite consensus disorder prediction 769 865 - -
Gso1g1306 1017 MobiDBLite consensus disorder prediction 771 808 - -
Gso1g1306 1017 MobiDBLite consensus disorder prediction 739 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1306 Gso-Chr1 49553928 49562470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1306 K12400 - gmx:100819573 1914.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1306 1 49553928 49562470 Gso1g1306 1 49553928 49562470 ECH
Gso1g1306 1 49553928 49562470 Gso9g1804 9 42520765 42529415 GST