Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1803 ATGGCGACTGTATCCTGCGCGAACCTGGAATCCTTCATTGGTTGCTTCATATGCTTGATTTCCAAGTGCGAGATTCGCTACGAGGGCGTTCTCTATTTCTTCAACATTCAAGATTCCATCATCGGCTTGAAGGACGTTAGATCCTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTTATATGGTTTATGAATACATTCTTTTCCGAGGAAATAATATTAAGAATTTGCAGATCAAGTTCCCCGCCCCATCTTCCAAATTAGAAGAGCAGGTTTTTAGTGATCCAGCTATTATTCAGTCGGAATATTCTGGGTTGCTAAGTTCTCCAGTGGTTGGGTTGCTAAGTTCTCCAGTGGCCTCAGTTGGTGGTAGAAGTTTGACAGAATCAATTCAAAGGCAAGATAGCCCTGCAATATCCAGTAAAGCCTTTCCTGCTGGGTTGCCTTCTCATCAGTCTGTAACTCAGCCGGGACCTTCAAATTCATCTGCTGCTACTCAAGTTGCTAGTCATCCATCTTTTTTTGCAGCAATGGATTGGCAAGGACCCAGTCGGATATCTAGCAGTAGTTCTCATTCTCTGCTACAATCTAGTTCTCGTCAACCCCCATCACTGGCAGCATCCTTAGCTGTGCAGAATCAGATGCAAAATGCAGAAACTCAGGTACCTATAAAAGGGGGATGGACAGCTTTATCAGACTATGGTCTACCTGTATCTTCTGCCATGGCTTCTCTCGTAAATCAGACTCATCCACCTTCTCTTACCTCTTTAAAAAATTCTGATTCTCTTGATATTCCATCCCTTTTGTCTACTAAGCCACCTGTATCATATTCTGCATCCATGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCAACGCTCCAAGACATAAATTCTATTCAAGCTCAAATATCTGGAAACATTTGTCCTGACCCAAGGTCAATTCATCCTCAACATTCTGTCCATCGTTCAGCTCCTTCATTTGTTGATTCTACTTCAGGTTCCTTGCCAACAGCACCATCTTTGTTAACCCCAGATCAATTTGCTTATCCTAGAGAACAGTTATTGTCTTTAACTCATTTGAATCCTACTCAGAAGGATATGGGTTCTCTGACTCTAACATCCTCTGGTTCCTCTGCATTAATGCCTTCTCCAGCATCTCAGGCACCACTGCTTCCACTACCAACTTCAGTGCAAAAGCTTCCATGCACAGCTCCACAATACACTGAAGAGTCTGATTTAGAGGCCATCAATGAAAAGTTCAAAAAAAATGTAGTATGGGGTTCTTTTGGAAAGGCAACCACAAAAATTGAGGGAGTGGATAATGCTTCTCTCCCAGCTCTACAATACACTGAAGAGTTTGATATTGAGGCCATCAATGAAAAGTTCAAAAAAAATGTAGTATGGGGTTCTTTTGGAAAGGCAATCACAAAAATAGAGGGAGTGGAGGATAATGCTTCTCTTAGTTTGGGTGACAGAGAATGTCCTGGGGTGATACCGAACCCTAAGACTGGATACAAGAAAGATGACTTTTTTGATACAATTTCTTGCAACTCTTCGACTGGTGGATCAAGGAGTGGACCAAATCTTTTCTCTGAGAGAATGAAACAGGATACTGAGACATCTGACAGTTTCCAGCAGAGGCCTAATTTTACTTCTGGTGCTGGACGGGGTGCGGATTTCAGGGGCGCAAATAATTGGGGAAGGGGTTATGGCTACAATAGGAGAGGGCGTGGTCCAAACTTTCCTTTTTAG 1770 0.4271 MATVSCANLESFIGCFICLISKCEIRYEGVLYFFNIQDSIIGLKDVRSYGTEGRRKDGPQVPPSYMVYEYILFRGNNIKNLQIKFPAPSSKLEEQVFSDPAIIQSEYSGLLSSPVVGLLSSPVASVGGRSLTESIQRQDSPAISSKAFPAGLPSHQSVTQPGPSNSSAATQVASHPSFFAAMDWQGPSRISSSSSHSLLQSSSRQPPSLAASLAVQNQMQNAETQVPIKGGWTALSDYGLPVSSAMASLVNQTHPPSLTSLKNSDSLDIPSLLSTKPPVSYSASMTFDGSNMPQFSSTLQDINSIQAQISGNICPDPRSIHPQHSVHRSAPSFVDSTSGSLPTAPSLLTPDQFAYPREQLLSLTHLNPTQKDMGSLTLTSSGSSALMPSPASQAPLLPLPTSVQKLPCTAPQYTEESDLEAINEKFKKNVVWGSFGKATTKIEGVDNASLPALQYTEEFDIEAINEKFKKNVVWGSFGKAITKIEGVEDNASLSLGDRECPGVIPNPKTGYKKDDFFDTISCNSSTGGSRSGPNLFSERMKQDTETSDSFQQRPNFTSGAGRGADFRGANNWGRGYGYNRRGRGPNFPF* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1803 589 PANTHER SCD6 PROTEIN-RELATED 7 442 - -
Gso9g1803 589 PANTHER SCD6 PROTEIN-RELATED 453 585 - -
Gso9g1803 589 MobiDBLite consensus disorder prediction 150 172 - -
Gso9g1803 589 MobiDBLite consensus disorder prediction 130 172 - -
Gso9g1803 589 MobiDBLite consensus disorder prediction 523 589 - -
Gso9g1803 589 MobiDBLite consensus disorder prediction 523 540 - -
Gso9g1803 589 SMART FDF_2 453 551 IPR019050 -
Gso9g1803 589 SUPERFAMILY Sm-like ribonucleoproteins 11 83 IPR010920 -
Gso9g1803 589 CDD LSm14_N 10 83 IPR025609 -
Gso9g1803 589 Pfam FDF domain 454 548 IPR019050 -
Gso9g1803 589 MobiDBLite consensus disorder prediction 325 347 - -
Gso9g1803 589 Pfam Scd6-like Sm domain 12 83 IPR025609 -
Gso9g1803 589 MobiDBLite consensus disorder prediction 322 349 - -
Gso9g1803 589 Gene3D - 3 86 - -
Gso9g1803 589 SMART LSM14_2 8 107 IPR025609 -
Gso9g1803 589 ProSiteProfiles FFD box profile. 509 524 IPR025761 -
Gso9g1803 589 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 453 585 - -
Gso9g1803 589 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1803 Gso-Chr9 42509111 42515632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1803 K18749 - gmx:102669894 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1305 1 49542379 49549038 Gso9g1803 9 42509111 42515632 GST