Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1784 ATGGATGCTATAAGGAAGCAAGCAAGTAAATTGAGGGAGCAAGTTGCCAGGCAACAGCAGGTTATACTTAGACAGTTGGGCCAAATTAGCAATGAACCGCTCATGATTGATGAATCCGAAATTGAATGTCACCAGCAACTTCAAAAGTTGTACACTTCGACAAAGACAGCTAAGCATTTTCAGCGGCATATTGTTCGTGCAATTGAAGGATTCGTTTCTGTTTGCTCCAAGCAAATGGAGATAGTGAGGAGGATGGCTAGGGACTGTTGTAAGTATGGGACAGAGAATCTTGGTAGTAGTTACCTCCTTGCAAGGGCTTCTCTTCAATTTGGTAACACATATGATACAATGGAAAATGAGAGAGAGACTCTGCTCGGGATCTTAGGCGATCAGATCTCTGAGCCACTACGGGCACAGATAACAGGAGCTCCTTTGGAGGATGCACGCCACCTCACTCGCCGCTATGACAAACTTCATCAAGAGGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGAATTCTTCTGTTTCTGCAGAGAGTTCCGCGAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAACTTAAATCTGCCTTGGCAGCACTTGGTAGAGAAGCAACCTCTGCTATGTTGTCTGTCGAAGAACAGCAGCAACAGATGACTCTCCAGAGCCTTCGTACAATGGTGGATGCTGAGAGATCCTATCATCAGCATGTCCTTGTTATTCTAGAGAAACTATATACTGAGATAATTGAGGACAGACAACCAAAAGAGGCTACATCATTTACACTGCCAAAAGATGGATATAATCAACCTGCAGATGAGAATGCTAATTCAAGTGGCATTGATTATAAACACAACAGTCAAACAGCCACATACTTTTTTGCAAAGGTCGTACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGGTTGGACCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGGTTTCCCTCTGCTTATGTAGAGAGACAGGACATGATACCAGCCAGCAAGATAACAGAATAA 1089 0.4389 MDAIRKQASKLREQVARQQQVILRQLGQISNEPLMIDESEIECHQQLQKLYTSTKTAKHFQRHIVRAIEGFVSVCSKQMEIVRRMARDCCKYGTENLGSSYLLARASLQFGNTYDTMENERETLLGILGDQISEPLRAQITGAPLEDARHLTRRYDKLHQEVEAQAAEVLRRRSKLRNSSVSAESSARLQNAETRLKELKSALAALGREATSAMLSVEEQQQQMTLQSLRTMVDAERSYHQHVLVILEKLYTEIIEDRQPKEATSFTLPKDGYNQPADENANSSGIDYKHNSQTATYFFAKVVHPFDAQAEGELSLSVDDFVVVRQVGPNGWSEGECKGNAGWFPSAYVERQDMIPASKITE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1784 362 SMART SH3_2 298 353 IPR001452 GO:0005515
Gso9g1784 362 Coils Coil 148 179 - -
Gso9g1784 362 Coils Coil 1 21 - -
Gso9g1784 362 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Gso9g1784 362 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Gso9g1784 362 Coils Coil 182 209 - -
Gso9g1784 362 Gene3D Arfaptin homology (AH) domain/BAR domain 28 257 IPR027267 -
Gso9g1784 362 PANTHER SH3 DOMAIN-CONTAINING 1 362 - -
Gso9g1784 362 SUPERFAMILY SH3-domain 298 354 IPR036028 GO:0005515
Gso9g1784 362 Gene3D SH3 Domains 298 352 - -
Gso9g1784 362 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 362 - -
Gso9g1784 362 MobiDBLite consensus disorder prediction 268 284 - -
Gso9g1784 362 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Gso9g1784 362 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1784 Gso-Chr9 42306803 42311397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1784 - - gmx:100819767 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1285 1 49301098 49305630 Gso9g1784 9 42306803 42311397 GST