Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1285 ATGGATGCTATAAGGAAGCAAGCAAGCAAATTGAGGGAGCAAGTTGCCAGGCAACAGCAGGCTATACTTAGACAGTTGGGCCAAATTAGCAATGAACCGCTCATGACTGATGAATCTGAAATTGAATGTCTCCAGCAACTTCAAAAGTTATACACTTCTACAAAGACAGCCAAGCATTTTCAGCGGCATATTGTTCGTGCTATTGAAGGATTCATTTCTGTTAGCTCCAAGCAGATGGAGATAGTGAGGAGGATGGCAAGGGACTGCTGTAAGTATGGGACTGAGAATCTAGGTAGTAGTTACCCCCTTGCAAGGGCTTCTCTTCAATTTGGTAACACATACGATACAATGGAAAATGAGAGGGAAACTTTGCTCGGGATCTTGGGTGATCAGATCTCTGAGCCACTGCGGGCACAGATAACAGGAGCTCCTTTGGAGGATGCACGCCACCTCACTCACCGCTATGACAAACTTCATCAAGAGGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGCCGATCAAAGTTGAGGAATTCTTCTGTTTCTGCAGAGAGTGCTGTGAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAACTTAAATCTGCCTTGGCAGCACTTGGTAGAGAAGCAACTGCTGCTATGTTGTCTGTCGAAGAACAACAGCAACAGATGACTCTCCAGAGTCTTCGTACAATGGTGGATGCTGAGAGATCCTATCATCAGCATGTCCTTGTTATTCTAGAGAAACTATATACTGAGATAATTGAAGAGAGACAACCAAAAGAGGCTACATCATTTCCACTGCCAAAAGATGGATATAATCAACCTGCAGATGAGAATGCTAATTCAAATGGCATCGATTATAAACACAACAGTCAAACAGGCACATACTTTTTTGCAAAGGTCATACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGGTTGGCCCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGGTTTCCCTCTGCTTATGTACAGAGACAGGACATGATACCAGCCAGCAAGATAACAGAATAA 1089 0.4399 MDAIRKQASKLREQVARQQQAILRQLGQISNEPLMTDESEIECLQQLQKLYTSTKTAKHFQRHIVRAIEGFISVSSKQMEIVRRMARDCCKYGTENLGSSYPLARASLQFGNTYDTMENERETLLGILGDQISEPLRAQITGAPLEDARHLTHRYDKLHQEVEAQAAEVLRRRSKLRNSSVSAESAVRLQNAETRLKELKSALAALGREATAAMLSVEEQQQQMTLQSLRTMVDAERSYHQHVLVILEKLYTEIIEERQPKEATSFPLPKDGYNQPADENANSNGIDYKHNSQTGTYFFAKVIHPFDAQAEGELSLSVDDFVVVRQVGPNGWSEGECKGNAGWFPSAYVQRQDMIPASKITE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1285 362 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 362 - -
Gso1g1285 362 Coils Coil 1 21 - -
Gso1g1285 362 Coils Coil 182 209 - -
Gso1g1285 362 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Gso1g1285 362 PANTHER SH3 DOMAIN-CONTAINING 1 362 - -
Gso1g1285 362 SMART SH3_2 298 353 IPR001452 GO:0005515
Gso1g1285 362 Gene3D Arfaptin homology (AH) domain/BAR domain 33 264 IPR027267 -
Gso1g1285 362 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Gso1g1285 362 Coils Coil 159 179 - -
Gso1g1285 362 Gene3D SH3 Domains 298 352 - -
Gso1g1285 362 SUPERFAMILY SH3-domain 298 354 IPR036028 GO:0005515
Gso1g1285 362 SUPERFAMILY BAR/IMD domain-like 45 254 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1285 Gso-Chr1 49301098 49305630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1285 - - gmx:100816554 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1285 1 49301098 49305630 Gso1g1285 1 49301098 49305630 ECH
Gso1g1285 1 49301098 49305630 Gso9g1784 9 42306803 42311397 GST