Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1723 ATGGATCACATTCATAGGTTACGTTGTTTTGGGACAATACCCAAAATTCCTTTTCTATTGCTACTTTCCCTGCTTCTCTTCAGTTTCGTTAACGCATCCTTCGACCTCGCTACTATACCCTTCAACGACGGCTATTCTCCGCTCTTCGGAGCTAGCAACGTTGTTCGCTCCGAGGATGGATACGGCGTACAACTCCGCCTCGATCGCTACACAGGTTCGGGTTTCATTTCCTCCAGTATGTACCAGTATGGATTCTTCAGCGCGAGAATCAAGTTACCATCGAATTATAGTGCTGGTATTTGCGTGGCCTTTTATACATCAAACGGTGATGTGTTCGAGAAGTCCCATGATGAGTTGGACTTTGAATTCCTAGGTAACGTTGCCGGAAAACCATGGCGATTTCAGACGAACTTGTACGGCAACGGCAGCACAAATCGTGGCCGTGAGGAGCGGTACCGTCTGTGGTTCGATCCAACCAAAGAATTCCACAGATACAGCATCCTTTGGACCGCAAAGAATATCATATTTTACATTGATGAAGTTCCAATTAGAGAAGTGCTACAAAGTGAAGAAATGGGAGGTGACTACCCATCAAAGCCAATGTCATTATACGCCACCATATGGGATGCATCAAATTGGGCCACATCCGGTGGAAAATACAAAGTGAACTATAAGTATGCACCTTTTGTGACCGAATTCAAGGACCTAGTCCTAAAGGGTTGCTCCGCCGATCCCATTCAAGAGGTTACCGGCACCAAGTCTTGCTCCGACCAACACGCCGATCTCGAGGCTCAAGACTATGCCGGCGTGACCCCCATGCGCCGCCTCACCATGCGGCGGTTCCGTCAGCGTTACATGTACTATTCATATTGCTATGATACTTTAAGGTACCCTTTGCCACAACCCGAGTGTGTCATTGTACCCTCCGAGAAACAAAGGTTTAAGGAGACCGGAAGGTTGAAATTTGGCGGCAGTCACCACTGGCAATCTCGACGGAGGGGCCGTACAACAACTCCGGTGGATCATACCGATCAGGGTGATATGTGA 1047 0.4814 MDHIHRLRCFGTIPKIPFLLLLSLLLFSFVNASFDLATIPFNDGYSPLFGASNVVRSEDGYGVQLRLDRYTGSGFISSSMYQYGFFSARIKLPSNYSAGICVAFYTSNGDVFEKSHDELDFEFLGNVAGKPWRFQTNLYGNGSTNRGREERYRLWFDPTKEFHRYSILWTAKNIIFYIDEVPIREVLQSEEMGGDYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFVTEFKDLVLKGCSADPIQEVTGTKSCSDQHADLEAQDYAGVTPMRRLTMRRFRQRYMYYSYCYDTLRYPLPQPECVIVPSEKQRFKETGRLKFGGSHHWQSRRRGRTTTPVDHTDQGDM* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1723 348 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 25 327 IPR044791 GO:0004553
Gso9g1723 348 MobiDBLite consensus disorder prediction 334 348 - -
Gso9g1723 348 PIRSF EndGlu_transf 10 309 IPR016455 GO:0010411|GO:0016762|GO:0042546
Gso9g1723 348 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 32 233 IPR000757 GO:0004553|GO:0005975
Gso9g1723 348 Pfam Glycosyl hydrolases family 16 45 225 IPR000757 GO:0004553|GO:0005975
Gso9g1723 348 Gene3D - 28 304 - -
Gso9g1723 348 MobiDBLite consensus disorder prediction 322 348 - -
Gso9g1723 348 CDD GH16_XET 37 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Gso9g1723 348 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 306 IPR013320 -
Gso9g1723 348 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 25 327 - -
Gso9g1723 348 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 266 304 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Gso9g1723 348 ProSitePatterns Glycosyl hydrolases family 16 active sites. 118 128 IPR008263 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1723 Gso-Chr9 41666836 41670179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1723 18 326 Glycoside Hydrolase AT1G32170 70.227 8.09e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1723 K08235 - gmx:100800720 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0123 1 1364070 1367454 Gso9g1723 9 41666836 41670179 GST