Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1722 ATGGCTACTAAATTCAAGCGTGTATCCTCCATTCGGAAGATCACACATCTGAGCAATGATATGGATCAGGAGGGTGCGAATGGGGGGATTGCTACTACCTACTCAGTTCACATTCCTCCAACACCTGATAACCAGCCTATGGAGATTTCGCTGGAGAGGTCGAATTCTCGGAGAGTGGAGGACCAATACGCTTCGAGTTCTTTGTTCACAGGTGGTTTTAATCAGCTCACACGTGCTCATTTGAAGGACAAGGTGATCGAGTCAGAATCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCTTGTGCAGTACCTGGGTGTGATAGAAGTCTCATGACTAATGAAAGAGGGCTGGATGTGGTTCCTTGTGAGTGTGATTACAAGATTTGTAAGGATTGTTATATGGATGCTTTGAGGGCTGGTGAGGGGATTTGCCCTGGTTGTAAGAAGCCTTACAAGGAGGACCCTGAGCATGAGCTGCAAGATGTTGCCAACTCACAGGCACTGCCTTTGCCTGCGCCTCCTGGTGCTGCTCATGGGGTTAATAAGATGGACAAAAGTTTGTCGTTCCCGAGGAGCCAGAGTAATGAGTTTGATCATGCTAAGTGGTTGTTTGAAACCAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTAATAAAGAAGAGGAGCCTGATGCCAGTTCTGGTTTTGGCTCTGATTGGATGGAGGGTGACCCTAATGTGTTCAAGGAGAAGCAGTGGAAGCCCTTGACCCGCAAATTGAGTATTTCTGCTGCAATTCTCAGTCCTTATCGGCTGATGATATTAGTTCGGCTAGTGGTTCTAGTTTTGTTCCTAAAGTGGAGGGTCGAAAACCCCAATGAGGATGCAGTCTGGCTGTGGGGAATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGACCAGCTTCCTAAGCTCTTCCCCGTAAACCGTGTTGCCGATCTTGATGTTTTGAAAGACAAGTTTGAAACTCCTAATCCCACCAATCCTACTGGGAAATCTGATCTTCCAGGAATAGATATGTTTGTCTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCAAATACCATTCTCTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAGCTTTTGCCAATATGTGGGTTCCTTTTTGTCGGAAGCACCACATTGAGCCCAGGAACCCAGAATCTTATTTTAACCTGAAGAGAGATCCCTACAAGAACAAAGTGCGGTCTGATTTTGTGAGGGACCGCAGGCGAGTAAAGCGTGAGTATGACGAGTTCAAGGTACGGATTAATAGCCTTCCTGATTCGATCCGGCGCCGTTCTGATGCATATAATGCCAGAGAAGAAATGAAGGCAATGAAGAAGTGGAGAGAGGATAGAAATGAAGAACCAATGGAAAATTTGAAGATTCCTAAAGCTACATGGATGGCTGATACTAAGCACTGGCCTGGTACTTGGACAACTGCTGCACCGGAGCATTCAAGGGGTGATCATGCAAGTATCATACAGGTAATGTTACAACCCCCAAGTGATGAACCACTGACTGGAAAAGAATCAGATTCAAATGCCTTGGATTTCAGTGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCAGGGGCCATGAATGCCTTGGTTCGAGCCTCGGCCATAATGTCCAATGGCCCTTTCATACTTAATCTTGACTGTGACCATTACATATACAACTCTGAGGCACTGAGAGAAGGAATGTGCTTCATGATGGACCGCGGTGGGGACAGGCTCTGCTATGTTCAATTTCCTCAAAGGTTTGAAGGAATCGACACCAATGATCGCTATGCGAACCATAACACTGTCTTCTTTGATGTCAATATGCGCGCTCTTGATGGAATCCAAGGTCCTGTATATGTTGGAACAGGATGTCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATTAAAGAAGAGGGCGGTTGGTTTGGTGGGAAGGAGAAGAAGAAGAAATCCTCAACGGTGGCCTCTGTCTCTGAGTCATTGAGGAATGGCAGCATAGAGGAAGAAGAAATGAGCAGTGATCTTGTTCCAAAGAAATTTGGCAACTCAAGTCTTCTTGTTGATTCAGTAAGGGTGGCTGAGTTCCAAGGCCTACCCCTTGCTGATGATGATTCATCTATGAAATATGGGCGTCCACCCGGTGCTCTAACTCTCCCTCGTGATCCTCTTGATGTTGCTACAGTTGCTGAGGCCATCAATGTCATCTCGTGCTGGTACGAAGACAAAACTGAATGGGGCCTTAGAGTTGGGTGGATCTATGGATCAGTTACTGAGGATGTTGTGACAGGCTACAGAATGCACAATAGAGGATGGAATTCTATATATTGTGTCACCAAAAGGGATGCCTTCCGCGGCACTGCTCCAATCAATCTCACAGATAGGCTTCACCAGGTTCTTCGCTGGGCAACCGGCTCAGTTGAAATCTTCTTTTCCCGCAACAATGCTCTTTTTGCCAGCTCTAGATTGAAACTTCTTCAGAGGATTGCTTACCTTAATGTTGGAATTTATCCATTCACTTCCATCTTCCTTATCGTGTATTGCTTCGTTCCTGCTCTCTCACTTTTCACTGGCCAGTTCATTGTTCAAACCCTTCAAGTCACCTTCCTAGTTTACCTCTTGGGCATAACCTTGACCCTTGTCATCCTTGCTGCTTTGGAAATCAAGTGGTCCGGCATTGAGCTCGAAGAGTGGTGGAGGAATGAGCAATTCTGGTTGATTGGAGGCACAAGTGCACACCTTGCTGCTGTGCTCCAGGGTCTGCTGAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCCGGCGGTGATGACGAAAACGATGAATTTGCCGATCTCTATGTCATCAAGTGGACATCTCTTATGATACCACCAATAACTATCATGATGGTTAATCTGATAGCCATTGCTGTTGCTGTTAGCAGAACTATATACAGCGAAGATCGCGAATGGAGCAGCTTGCTTGGAGGTGTGTTTTTCAGTTTTTGGGTCTTGTCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTTTGGTCGGGGCTAATTTCAATTACTATCTCACTCCTTTGGGTTGCTATTGATCCTCCCTCTGGCAGCAGCCAAATTGGAGGGTCATTCCAATTCCCTTGA 3354 0.4615 MATKFKRVSSIRKITHLSNDMDQEGANGGIATTYSVHIPPTPDNQPMEISLERSNSRRVEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSSCAVPGCDRSLMTNERGLDVVPCECDYKICKDCYMDALRAGEGICPGCKKPYKEDPEHELQDVANSQALPLPAPPGAAHGVNKMDKSLSFPRSQSNEFDHAKWLFETKGSYGYGNAMWPNKEEEPDASSGFGSDWMEGDPNVFKEKQWKPLTRKLSISAAILSPYRLMILVRLVVLVLFLKWRVENPNEDAVWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRVADLDVLKDKFETPNPTNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAAAFANMWVPFCRKHHIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINSLPDSIRRRSDAYNAREEMKAMKKWREDRNEEPMENLKIPKATWMADTKHWPGTWTTAAPEHSRGDHASIIQVMLQPPSDEPLTGKESDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCFMMDRGGDRLCYVQFPQRFEGIDTNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEEGGWFGGKEKKKKSSTVASVSESLRNGSIEEEEMSSDLVPKKFGNSSLLVDSVRVAEFQGLPLADDDSSMKYGRPPGALTLPRDPLDVATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWNSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSRLKLLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTLQVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSQIGGSFQFP* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1722 1117 SUPERFAMILY RING/U-box 92 158 - -
Gso9g1722 1117 Pfam Cellulose synthase 351 1106 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso9g1722 1117 SUPERFAMILY Nucleotide-diphospho-sugar transferases 366 911 IPR029044 -
Gso9g1722 1117 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 550 705 IPR029044 -
Gso9g1722 1117 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 43 1115 - -
Gso9g1722 1117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 169 IPR013083 -
Gso9g1722 1117 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 43 1115 - -
Gso9g1722 1117 Pfam RING/Ubox like zinc-binding domain 105 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1722 Gso-Chr9 41658020 41662811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1722 6 1117 Glycosyltransferase AT3G03050 74.048 0.0 1725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1722 K20924 - gmx:100813901 2160.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0124 1 1373706 1378699 Gso9g1722 9 41658020 41662811 GST