Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0124 ATGGCTTCTAAATTCAAGAGTGTGTCCTCCATTCGGAAGATCACGCATCTGAGCGGTGATATGGATCAGGAGGATGCGAATGGGGGAAGGGCTAGTCTTGATAACTACTCAGTTCACATTCCTCCAACGCCTGATAACCAGCCTATGGAGATTTCGCTGGAGAGGTCGAATTCTCGGAGAGTGGAGGACCAATACGCTTCTAGTTCTTTGTTCACCGGTGGCTTTAATCAGCTCACACGTGCTCATTTGAAGGACAAGGTGACTGAGTCAGAATCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCTTGTGCAGTGCCTGGGTGTGATGGAAGTCTCATGACTAATGAGAGAGGGTTGGATGTGGTTCCTTGTGAGTGTAATTACAAGATTTGTAGGGATTGTTATATGGATGCTTTGAGGGCTGGTGAGGGGATTTGCCCTGGTTGTAAGGACCCTTACAAGGAGCCTGAGGTTCAAGGTGGTGTGGCCAACTCACAGGCACTGCCTTTGCCTCCGCCTCCTGGTGCTAATAAGATGGACAAGAGTTTGTCGTTCTTGAGGAGCAAGAATAATGAATTTGATCATGCTAAGTGGTTGTTTGAAACCAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTAATAAAGAAGAAGAAGCTGATGCCAGTTCTGGTTCTGGCTCTGATTGGATGGGGGGTGACCCTAATGTGTTCAAGGAAAAGCAGTGGAGGCCCTTGACCCGGAAATTGAGTATTTCTGCTGCAATTCTCAGTCCTTATCGGCTCATGATATTAGTTCGGCTAGTGGTTCTAGTTTTCTTCCTAAAGTGGAGGGTCGAAAACCCCAATGAGGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGACCAGCTTCCTAAGCTCTTCCCCGTAAACCGTGTTGCCGATCTTGATGTTTTGAAAGAAAAGTTTGAAACTCCTAATCCCACCAATCCTACTGGGAAATCTGATCTTCCAGGAATAGATATGTTTGTCTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCAAATACCATTCTCTCTATTCTAGCTACTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGACGATGGAGGAGCACTTTTAACTTTTGAGGCCATGGCCGAGGCTGCAGCTTTTGCCAATATGTGGGTTCCTTTTTGTCGAAAGCACAACATTGAACCCAGGAACCCAGAATCTTATTTTAACCTGAAGAGAGATCCCTACAAGAACAAAGTGCGGTCTGACTTTGTGAGGGACCGCAGGCGAGTAAAGCGTGAGTATGATGAGTTCAAGGTTCGGATTAATGGCCTTCCTGATTCGATTCGGCGCCGATCTGATGCTTATAATGCCAGAGAAGAAATGAATGCAATGAAGAAGTGGAGAGAGAATGGAAATGAAGAACCAATGGAGAGTTTGAAGATTCCTAAAGCCACATGGATGGCTGATAAAGAACCCAGCTGCTGGCCTGGTACCTGGACAACTGCTGCACCGGAACATTCCAGGGGTGATCATGCCAGTATCATACAGGTAATGTTACAACCCCCAAGTGATGAACCACTGACTGGCAAAACATCAGATTCAAATGCCTTGGATTTCAGTGAAGTTGATATTCGTCTTCCTATGCTTGTGTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCAGGGGCAATGAATGCCCTTGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATACTTAATCTTGACTGTGACCACTACATATATAACTCTCAAGCACTGAGAGAAGGAATGTGCTTCATGATGGACCGCGGTGGGGACAGGCTCTGCTATGTTCAATTTCCGCAAAGGTTTGAAGGAATTGACCCCAATGATCGCTATGCGAACCATAATACTGTCTTTTTTGATGTCAATATGCGTGCTCTAGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGCCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATTAAAGAAGAGTCTGGTTGGTTTGGTCGGAAGAATAAGAAATCCTCAACGGTGGCCTCTGTCTCTGAAGCCAGTGCTGAGGAACAGTCATTGAAGAATGGACGCATAGAGGATGAAGAAATGACCAGTGCTCTTGTTCCAAAGAAATTTGGCAACTCAAGTCTTCTTGTTGATTCAGTCAGGGTGGCTGAGTTCCAAGGCCTTCCCCTTGCTGATCATTCATCTATCAAATATGGCCGTCCACCCGGTGCTCTAACTCTCCCTCGGGATCCTCTTGATGCTGCTACTGTTGCTGAGGCCATCAATGTCATCTCATGTTGGTATGAAGACAAGACTGAATGGGGCCTTAGAGTTGGATGGATTTATGGGTCAGTTACTGAGGATGTTGTGACAGGTTATAGAATGCACAATAGAGGATGGAAGTCTATATATTGTGTGACCAAAAGGGATGCCTTCCGCGGCACTGCTCCAATCAATCTCACTGATAGGCTTCACCAGGTTCTTCGGTGGGCAACCGGTTCAGTTGAAATCTTCTTTTCACGCAACAATGCTCTTTTGGCCAGCTCTAGATTGAAATTTCTGCAGAGGATTGCTTACCTCAATGTTGGAATCTATCCATTCACTTCCATCTTCCTTATTGTGTATTGCTTCGTTCCTGCTCTTTCACTTTTCACTGGCCAGTTCATTGTTCAAACCCTTGAAGTCACCTTCCTAGTTTACCTCTTGGGCATAACCTTGACCCTTGTCATCCTCGCTGCTTTGGAAATCAAGTGGTCTGGCATTGAGCTTGAAGAGTGGTGGAGGAACGAGCAATTCTGGTTGATTGGAGGCACAAGTGCTCATCTTGCTGCTGTGCTTCAGGGTCTACTAAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCTGGCGGCGACGACGAAAACGATGAATTTGCTGATCTCTATGTCATCAAGTGGACATCTCTTATGATACCACCAATCACAATCATGATGGTTAATCTGATAGCCATTGCTGTTGCTGTTAGCAGAACTATATACAGCGAAGATCGTGAATGGAGCAGCTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTCTTATCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTTTGGTCAGGGCTAATTTCAATTACTATCTCACTTCTTTGGGTTGCTATTGACCCTCCCTCTGGTAGTAGCCTAATTGGAGGGTCATTCCAATTCCCTTGA 3357 0.4581 MASKFKSVSSIRKITHLSGDMDQEDANGGRASLDNYSVHIPPTPDNQPMEISLERSNSRRVEDQYASSSLFTGGFNQLTRAHLKDKVTESESSHPQMAGAKGSSCAVPGCDGSLMTNERGLDVVPCECNYKICRDCYMDALRAGEGICPGCKDPYKEPEVQGGVANSQALPLPPPPGANKMDKSLSFLRSKNNEFDHAKWLFETKGSYGYGNAMWPNKEEEADASSGSGSDWMGGDPNVFKEKQWRPLTRKLSISAAILSPYRLMILVRLVVLVFFLKWRVENPNEDAIWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRVADLDVLKEKFETPNPTNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILATDYPVEKLSCYVSDDGGALLTFEAMAEAAAFANMWVPFCRKHNIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEMNAMKKWRENGNEEPMESLKIPKATWMADKEPSCWPGTWTTAAPEHSRGDHASIIQVMLQPPSDEPLTGKTSDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEESGWFGRKNKKSSTVASVSEASAEEQSLKNGRIEDEEMTSALVPKKFGNSSLLVDSVRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWKSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTLEVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSLIGGSFQFP* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0124 1118 MobiDBLite consensus disorder prediction 15 49 - -
Gso1g0124 1118 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 548 702 IPR029044 -
Gso1g0124 1118 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Gso1g0124 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 169 IPR013083 -
Gso1g0124 1118 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 48 1116 - -
Gso1g0124 1118 MobiDBLite consensus disorder prediction 711 731 - -
Gso1g0124 1118 Pfam Cellulose synthase 347 1106 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso1g0124 1118 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 696 IPR029044 -
Gso1g0124 1118 SUPERFAMILY RING/U-box 94 160 - -
Gso1g0124 1118 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 48 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0124 Gso-Chr1 1373706 1378699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0124 22 1118 Glycosyltransferase AT3G03050 74.776 0.0 1728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0124 K20924 - gmx:100813900 2209.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0124 1 1373706 1378699 Gso1g0124 1 1373706 1378699 ECH
Gso1g0124 1 1373706 1378699 Gso9g1722 9 41658020 41662811 GST