Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1554 ATGCTTAGATATTTTCACCGAATTTCCGGCGACCGGCCAGCCACCGCTCCGAAGGTTCAGCAACCCAATCACAACGTCACTGCCGCCGTCAACCAACCGCCGCCGGCAGATGATGTCAGAGGAACCGACACGCCGCCGGAGAAGGTGCCGCGGCGCGTTTTACCGGCAAATTTCGCGCCAAACGAGAACAACTCTGGTCCCTCCCTGTTTGAGAGCATCATGCACAAATTCGTCAAGGTCGATGACAACGAAAGAGTTATTCAGAGGAGCCACTCATTGAATGGTAGTTTGGCTAAATCTTCTTTACCAGTGGGAATATGTGCTGATACTGATCGTAAAGTGGTGAACATGGAAGAGACAGCTTTTCAACCTTTAGGGAAAGTGAAAGATAATGCTGTGAATTTCAAGGAAAAGGCTAATCAGGAGAACTTTGCACTGGTTGAAACTGATGATGATGTTACTGGACCAGAAACCCCAGGGATGCTGCCTCTTGCTTCTCACCTGAAGCGAAGTCGAGAGGATGGATCCAAGTTTGGTTCGTTGCTGAATTCTGGCAAACGAGTTAGATTTCTCGACGATTCACTGGAATTGGACATGACTAAGAAGGAAGCAGAAGTGGCTAGCAAGTTTGAATGGCTCAATCCTTCTCGAATCAGGGATGCTAATGGAAGAAGGTCAAATGATCCTTTGTATGATAGGACAACGCTTTATATTCCTCCAGAAGCTTTGGGGAAAATGTCAGCATCACAGAAACAGTATTGGAGTGTCAAATGTAAATATATGGATGTTTTGCTTTTTTTTAAAGTGGGAAAATTTTATGAGCTTTATGAAATGGATGCTGACATTGGCCATAAGGAGCTTGATTGGAAAATAACGTTAAGTGGTGTTGGAAAATGTCGGCAGGTTGGTATATCTGAAAGTGGGATTGATGATGCTGTTCAAAAGCTGGTTGCATGTGGGTATAAGGTTGGACGAGTGGAGCAATTAGAGACATCTGAAGAAGCAAAAGCTAGAGGAGCTAACTCTGTTATTCGGAGAAAATTAGTTCAGGTAGTCACTCCATCAACCAATGTGGATGGTAATATTGGTCCTGATGCTGTTCACCTTCTCTCAATAAAAGAGGAAAACAATGGCTTGGATAATGGTGCAGTTATGTATGGATTTGCTTTTGTTGATTGTGCTCGGCTTAGATTTTGGGTTGGCTCTATAGACGATGATGCATCCTGTTCTGCTTTGGGGGCTTTATTGATGCAAGTGTCACCCACGGAAGTTATATATGATAATAGAGGTTTATCCAAAGAAGCTCAGAAAGCACTTAGAAAATTCTCGTTGAATGGTTCGACGGCACTACAGTTCACTCCAGTTCAGTCGATGACTGACTTGGTGAGCAATGAAATTAGGGATTTAATTCACTCAAAGGGATACTTCAAAGGCTCGTCTCATTCACTGGATCATGTACTGAGAAGTGTGATTCATCGTGAAATCACCTTGTCTGCTCTAGTTGGGCTGATTGATCATCTGGATAGATTGATGTTGAATGATGCCCTACAGAATGGGGATTTATATACATACCAAGTTTACAGGGGTTGCCTTAAAATGGATGGTCCAACAATGATAAATCTAGAACTTTTTGTCAATAATGAGGATGGTGGCAAATCAGGTTCATTGTACAATTGTCTTGATAAGTGTGTAACTTCATCTGGAAAGCGGCTTCTTAGGAACTGGATCTGCTGTCCATTAGTAGATGCTGAAATAATTAACAACAGGCTTGATATAGTGGATGATCTAATGGCTAACCCAGAGATTGTGTCACATATTGCTCAACATCTTCGCAGGCTTCCAGACTTGGAACATTTGCTTGGCCGAATTAAGTCCAGCCTTCAATTATCAGGCCCTCTCTTATTGCCCTTCTTGGGAAAGAAAATATTGAAGCAGAGGGTGAAAGTGTTTGGATCACTTGTGAAAGGCCTTCGGACTGCTTTGAGCTTGTTGCTTCTTCTACAGAAAGAGCAGCCTCTAATATCGTCTTTGACCAAAGTTTTTAAACTTCCAATTCTGACTGGCAGTAACGGGCTCGACCAATTTCTTGCTCAGTTTGAAGCAGCAGTAGACAGCGACTTCCCAAATTACCAGAATCACAACGTTACGGATTCAGATGCTGAAACACTCACAATACTTGCTGAATTATTTTTGGAGAAAGCTGCTCAGTGGTTTGAAGTTGTTCATGCCATCAATTGCATTGATGTATTAAGATCTTTTGCTGTTACTTCTACCTTTTCTCGTGGAACTATGTCTAGGCCAGTCATAGTGGCATCAAAAGGTACAAGTAAAGACAATGGAGGAACTGTGCTCAAGATGAAGGGACTATGGCATCCATTTGCCCTTGGAGACAGTGGATGTTTGCCTGTCCCCAATGATGTAATCCTTGGTGAGAATGAAGATGGGTCGCATCCTCGAACTTTGCTGCTTACTGGACCAAACATGGGTGGAAAGTCAACACTTCTGCGTTCCACCTGTCTAGCTGTTATTATGGCCCAGCTAGGCTGTTATGTACCATGTGAAAGTTGTGTTCTCTCAGCTGTGGATATCATCTTCACACGACTTGGAGCCAAAGATAGAATCATGACAGGCGAGAGTACCTTCTTTGTTGAGTGTACTGAAACGGCCTTGGTGCTTCAGAATGCTACTCAAGATTCTCTTGTTATCCTTGATGAATTGGGTCGGGGAACAAGCACTTTTGATGGCTATGCCATTGCATATGCAGTATTCCGGCATCTGATTGAAAAAGTTAACTGTCGCATGCTATTTGCCACACACTACCATTCACTCACGAAAGAGTTTGCTTCCCATCCACGCGTCATAATGCAACATATGGCTTGCGCTTTCAAGTCAAAATCTGATACCCATTCCATGCGTGATCAGGAACTAGTTTTCCTATATCGGCTTGCCTCCGGACCATGTCCAGAGAGCTACGGGTTGCAGGTAGCCCTCATGGCTGGAATCCCAGAAAAAACGGTAAACATTGCTTCTAAGGCAAGCCAACAGATGAAAAAATCAATTGGACAAAGTTTTAGGTCAAGCGAACAGAGATCAGAGTTCTCAACCCTTCATGAAGAATGGTTGAAGACCTTGGTATCTATCTCAAGAATAGAGGATTGTAACTCTTTGGATGAAGATGCTTTAGATACATTAATTTGTCTGTGGTATGAACTTAAAACTTCATTTATATCAGGCAAGTAG 3240 0.4296 MLRYFHRISGDRPATAPKVQQPNHNVTAAVNQPPPADDVRGTDTPPEKVPRRVLPANFAPNENNSGPSLFESIMHKFVKVDDNERVIQRSHSLNGSLAKSSLPVGICADTDRKVVNMEETAFQPLGKVKDNAVNFKEKANQENFALVETDDDVTGPETPGMLPLASHLKRSREDGSKFGSLLNSGKRVRFLDDSLELDMTKKEAEVASKFEWLNPSRIRDANGRRSNDPLYDRTTLYIPPEALGKMSASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVQKLVACGYKVGRVEQLETSEEAKARGANSVIRRKLVQVVTPSTNVDGNIGPDAVHLLSIKEENNGLDNGAVMYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPTEVIYDNRGLSKEAQKALRKFSLNGSTALQFTPVQSMTDLVSNEIRDLIHSKGYFKGSSHSLDHVLRSVIHREITLSALVGLIDHLDRLMLNDALQNGDLYTYQVYRGCLKMDGPTMINLELFVNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLVDAEIINNRLDIVDDLMANPEIVSHIAQHLRRLPDLEHLLGRIKSSLQLSGPLLLPFLGKKILKQRVKVFGSLVKGLRTALSLLLLLQKEQPLISSLTKVFKLPILTGSNGLDQFLAQFEAAVDSDFPNYQNHNVTDSDAETLTILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSTFSRGTMSRPVIVASKGTSKDNGGTVLKMKGLWHPFALGDSGCLPVPNDVILGENEDGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFVECTETALVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHSLTKEFASHPRVIMQHMACAFKSKSDTHSMRDQELVFLYRLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGQSFRSSEQRSEFSTLHEEWLKTLVSISRIEDCNSLDEDALDTLICLWYELKTSFISGK* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1554 1079 SUPERFAMILY DNA repair protein MutS, domain III 534 757 IPR036187 -
Gso9g1554 1079 SUPERFAMILY DNA repair protein MutS, domain II 386 544 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 Gene3D MutS, connector domain 367 531 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 CDD ABC_MSH6_euk 785 1009 - -
Gso9g1554 1079 Gene3D DNA repair protein MutS, domain I 205 365 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 Pfam MutS domain I 249 359 IPR007695 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 Pfam MutS domain III 537 754 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 MobiDBLite consensus disorder prediction 1 48 - -
Gso9g1554 1079 Pfam MutS domain V 822 1016 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 232 1071 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gso9g1554 1079 MobiDBLite consensus disorder prediction 16 30 - -
Gso9g1554 1079 SMART mutATP5 818 1014 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 ProSitePatterns DNA mismatch repair proteins mutS family signature. 899 915 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 SMART DNAend 551 797 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 PANTHER DNA MISMATCH REPAIR PROTEIN MSH7 232 1071 - -
Gso9g1554 1079 Pfam MutS domain II 369 517 IPR007860 GO:0005524|GO:0006298|GO:0030983
Gso9g1554 1079 Gene3D - 775 1062 IPR027417 -
Gso9g1554 1079 Gene3D - 532 761 - -
Gso9g1554 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 1018 IPR027417 -
Gso9g1554 1079 SUPERFAMILY DNA repair protein MutS, domain I 235 356 IPR016151 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1554 Gso-Chr9 39824741 39833293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1554 K08737 - gmx:100818859 2104.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0756 7 8227835 8236341 Gso9g1554 9 39824741 39833293 GST