Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1509 ATGGCGTTCCCCAACACTTGCAAGCTCTCTGAATTGTCTTTCAATTCATCATTCGCATCACTGAACCATCCTCATAGCTCTTTCCGCAAATTCCCATTTCGCACTCTCACCTTCGCTTCTCTCCCAACCCCTAAACCCAACCCCTCCGCCCCCTGGCTCACCAAATCCCCCTCCCCCAAAAGGGCCATCGAACCCCTCACCGCCGGCGACCCTACTCCCGACAGAAAACCGCAGAACGCCGTCGATAGAATCGTCCTCCGGTTACGCAACCTCGGCTTGCCCTCCGAAGAAGAAGAACAAGAGCAAGAACATGAAGAAGAAATTCCGGCGACTAATCCGGCGCCGGTAACCGGAGAGGAGAGGCTGGGGGAGTTGCTCCAGCGGGAGTGGGTGCGCCCGGACGCCGTGTTGGTGGGTGAGGACGATGATGAGGAGGAAGAGATGATGCTGCCGTGGGAGAGGGATGAGGAGGAGAAGGAGGTGGTGGTGGTGAGTGAAGAGGGGTTGTTGAAGAAGAGGAGGGTTAGGGCTCCGAGTTTGGCTGATTTGACACTTGAGGATGAACTGTTGAGGAGGTTGAGGAGAGAGGGGATGCGTGTGAGGGAGAGGGTGAGTGTCCCCAAAGCTGGACTCACTGAGGAGGTGATGGAGAAGATTCATAAGAGGTGGAGGAAGGAGGAGTTGGTGAGGCTCAAGTTTCATGAGGAACTTGCAAAGGACATGAGGAAGGCTCATGAGATTGTTGAGCGTCGAACTGGAGGATTGGTTACGTGGAGGTCAGGCAGTGTTATGATGGTGTATCGTGGTATTGATTACCAAGGGCCTGACTCGCGGAAGGAACTTAATGAGAAGAAAGGTGATGGTTTTTTTGTGCCGGATGTCTCGAAAAGGGAAGACAGTACTGCAACCTCAACCTCAGAGAAGAGTGAGGTGGTTGTGAGGGAGCGAGAACATCCGGAGAATATGTCAGAGGCAGAAGCAGAGTACAATGCCCTCCTTGATGGTTTAGGTCCTCGGTTTTTTGGATGGTGGGGTACAGGGATTCTTCCTGTTGATGCTGATTTGCTTCCCCGGACAGTTCCAGGTTACAAAACGCCTTTTAGGCTTCTTCCTACTGGGATGCGTTCTCGGCTAACAAATGCAGAGATGACCAATTTAAGGAAGCTTGCAAAATCACTTCCTTGTCATTTTGCTGTAGGGAGAAATAGAAATCACCAAGGTCTGGCATGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTAGTTTCAAAGATTGCTGTCAAACGTGGGATCCAGAACACAAACAATGAACTGATGGCTGAGGAGCTGAAGATGTTAACAGGAGGGACCTTGCTGCTAAGGAATAAATATTTCATTGTTATATACCGTGGGAAAGACTTTGTTCCAACAAGTGTCGCTGCAGTTTTAGCTGAAAGAGAGGAATTAACAAAACAGGTACAGGACGTTGAAGACAAGGTGCGTTGCAGAGCAGTTGATGCAATTCCATCAGGGCAAGGTGAAGCAACGGCACAGGCTGGGACTTTAGCAGAGTTCTATGAGGCCCAAGCTCGATGGGGAAGGGAAATATCTCCTGATGAACGTGAGAAGATGATGGAAGAAGCTGCCAAAGCCAAGACTGCTAAGCTTGTCAGACAAATTGAACATAAAATATTTATAGCCCAGACTAAAAAGCTTAGAGCAGAAAAGCTCTTAGCCAAAATAGAAGCATCTATGGTTCCAGCTGGTCCTGATTATGATCAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGTAAAGTTGGTTTAAGAATGAAGCCATACTTACCACTTGGTATACGTGGTGTTTTTGATGGTGTTGTTGAGAATATGCATTTGCATTGGAAACACCGAGAACTTGTAAAATTGATGACGAAACAAAAGACTCTTGCTTTTGTTGAAGACACAGCAAGATTACTTGAATATGAGAGTGGTGGAATACTGGTGGCAATAGAGAAAGTTTCCAAAGAATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGCGGCCAATTACTCTTAGGCCTAGGAACCTTCTAACGAAGGGAAAGGCATTAAAGCGTCATGTAGCCATGCAACGTCATGAGGCTCTGAGTCAGCATATTACTGAATTGGAAAAAACTATAGAACAAATGAAAAAAGAACTTGGTATGACTCAAGATTCAGATGTTGAAGATGGGGGGAGCATCGAGGAAGATGACCATAACCAAATAGACATCTCAGAATTGGCCCTAAGTGAGGATGAAGATTCTGATGGTTATGATGATGAGGAAGACAGTGATTGGGACGATGGCGAGGCCTCCGAGTTTTCAGAATTCATAAATGATGAGCACCCTTGA 2376 0.4693 MAFPNTCKLSELSFNSSFASLNHPHSSFRKFPFRTLTFASLPTPKPNPSAPWLTKSPSPKRAIEPLTAGDPTPDRKPQNAVDRIVLRLRNLGLPSEEEEQEQEHEEEIPATNPAPVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPWERDEEEKEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSRKELNEKKGDGFFVPDVSKREDSTATSTSEKSEVVVREREHPENMSEAEAEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPSGQGEATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVEDGGSIEEDDHNQIDISELALSEDEDSDGYDDEEDSDWDDGEASEFSEFINDEHP* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1509 791 Pfam CRS1 / YhbY (CRM) domain 186 268 IPR001890 GO:0003723
Gso9g1509 791 Pfam CRS1 / YhbY (CRM) domain 378 462 IPR001890 GO:0003723
Gso9g1509 791 Pfam CRS1 / YhbY (CRM) domain 590 665 IPR001890 GO:0003723
Gso9g1509 791 SUPERFAMILY YhbY-like 184 274 IPR035920 -
Gso9g1509 791 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 40 788 - -
Gso9g1509 791 ProSiteProfiles CRM domain profile. 183 279 IPR001890 GO:0003723
Gso9g1509 791 MobiDBLite consensus disorder prediction 93 117 - -
Gso9g1509 791 Coils Coil 707 734 - -
Gso9g1509 791 Coils Coil 231 251 - -
Gso9g1509 791 MobiDBLite consensus disorder prediction 276 320 - -
Gso9g1509 791 SUPERFAMILY YhbY-like 378 469 IPR035920 -
Gso9g1509 791 MobiDBLite consensus disorder prediction 731 791 - -
Gso9g1509 791 MobiDBLite consensus disorder prediction 40 81 - -
Gso9g1509 791 ProSiteProfiles CRM domain profile. 587 687 IPR001890 GO:0003723
Gso9g1509 791 SMART CRS1_YhbY_2 378 462 IPR001890 GO:0003723
Gso9g1509 791 SMART CRS1_YhbY_2 589 676 IPR001890 GO:0003723
Gso9g1509 791 SMART CRS1_YhbY_2 185 268 IPR001890 GO:0003723
Gso9g1509 791 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 40 788 IPR045278 GO:0000375|GO:0003729
Gso9g1509 791 Gene3D - 589 691 IPR035920 -
Gso9g1509 791 Gene3D - 183 284 IPR035920 -
Gso9g1509 791 Gene3D - 377 470 IPR035920 -
Gso9g1509 791 SUPERFAMILY YhbY-like 588 686 IPR035920 -
Gso9g1509 791 MobiDBLite consensus disorder prediction 755 782 - -
Gso9g1509 791 ProSiteProfiles CRM domain profile. 376 473 IPR001890 GO:0003723
Gso9g1509 791 Coils Coil 471 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1509 Gso-Chr9 39350870 39359961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1509 - - gmx:100808013 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0792 7 8720252 8726666 Gso9g1509 9 39350870 39359961 GST
Gso8g0352 8 3333192 3339303 Gso9g1509 9 39350870 39359961 PCT
Gso9g1509 9 39350870 39359961 Gso8g0352 8 3333192 3339303 PCT