Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0352 ATGAGATTAAGCATGAAAAGTGCTTTACTATCAACACTCCCACCCTCTTCATCAGTTCTCTTATTCTCCTCCTACTCTAAATTCAAACTCAAATCCCCACTCGGAATTCCCATTCGCGCTCTCACCTCCTCTTCTCTCCCAACCACCCGCGACCACGATGATTTATTCGACCCTCTTTCCCTTCCCGCTCCCCAACACCTTCACAAAGCCACCAACGCCATCGAGAGAATCGCCCTCCGCTTGCGCAACTTAGGGTTAGCTTCCACCACCGACCTTGCCGACGCCGAAGACGATTTCCTGCGCCGCGAATGGCTTCGCCCCGACCAGGCGCTTTTTCCGTGGGACAAGGGACAAGAAGAAGACGCAGAGGAGCCCGGGGAACAGCAAAAGGAGAAGCTAAAGAAGAAGAACGTTAATGCGTTGACATTGGCGGAGCAAACGCTGGTGGAGGAGGAGCTGCGGCGATTGCGAACCCTTGGAATGAGTCTTAAGGAAAAGATCACTATTCCCAAAGCTGGCCTCACGCGAGCCGTGCTCGACAGGATTCACCGTCACTGGAGCAACTGCGAGCTGGTGAGGCTCAAGTTTCACGAGTTTCTTGCTCAGAACATGAAGTTGGCTCATCAAATTGTCGAGCATAGAACTAGAGGGTTAGTTATATGGAGGTCGGGGAGTTATATGTGGGTTTACCGTGGTAAGAATTATCAAGGGCCGGTGGAGAGTGATGCGACATCTATGGAAAAGAGTGAGGCAGTTTGGTGGAAGGGGGAGAACATGACGCCAGAGGAAGCAGAATTCAACAGGATGCTGGATGGCTTTGGTCCTCGATTTGTTGAATGGTGGGGTACTGGAATACTTCCCGTTGATGCTGATTCACTTCCCCCTATGGTTCCTGGTTACAAAACGCCTCTTAGGCTTCTTCCTGCCGGAATGCGTCCGCAACTGACCAATGATGAACTCACGAATATGCGGAAGCTTGCTAAATCTCTTCCTTGTCACTTTGCCTTGGGGAGAAATAGAAATCTTCAAGGTCTGGCATCTGCTATTCTTAGGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGGTGTCAAGCGTGGTATTGTGAATACAAACAATGAACTGATGGCTCAGGAACTGAAGGCATTAACAGGAGGTACCTTACTGCTAAGGAATAAATATTACATTGTAATATATCGTGGGAAGGACTTTGTTCCAACCAGTGTGGCTGCTGTTATTGCTGAAAGACAGGAATTGACAAAACAGGTGCAGGATGTTGAGGAGAAGGTGCGGTGCAAAGCTCTCGACTCAACTCCATCCGGGGAAGATGAATCAACAGCACAAGCAGGATCGTTGGCAGAGTTCTACGTGGCACAGGCATGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAGGATGATGCAAGAGGTTGCCAAAGCCAAAAATGCTAAGCTTGTCAAAAAAATTGAATGTAAACTAGCTGTTGCCCAGGCCAAAAGGCTTAGAGCAGAAAAGCTATTAGCAAAAATAGAAGCATCTTTGCTTCCAGTTGGTCCTGATTATGACAAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGTTCAGTTGGTTTAAGAATGAAGGCATACTTGCCACTTGGTATACGTGGTGTTTTTGATGGTGTTATTGAGAATATGCATTTGCATTGGAAACATCGAGAACTTGTTAAATTAATAACAAAACAAAAGACCCTTGCTTTTGTTGAAGACACAGCTAGGTTATTGGAATATGAAAGTGGTGGAATACTAGTAGCAATAGATAAAGTTCCTAAAGGATTTTCTCTTATTTACTACCGTGGAAAGAATTATAGGCGACCTATGACATTGAGGCCTAGAAACCTTCTAACGAAGGCAAAGGCATTGCAGCGTTCAATAGTCATGCAACGGCACGAGGCTCTGAGTCAGCATGTAACTGAATTGGGGGAAAAAATAGAAGAAATGAAAAAAAAACTTGGTTTGTCTCAGGATTTGGGGACTAAAGATAGGTGGAACGTAGAGGACCACAACCAAATAGACCATATATCAGAGTTCACCCAAAGTGAGGAGGAATACTCTGATGGAGATGACACTGACGGTTGA 2121 0.4597 MRLSMKSALLSTLPPSSSVLLFSSYSKFKLKSPLGIPIRALTSSSLPTTRDHDDLFDPLSLPAPQHLHKATNAIERIALRLRNLGLASTTDLADAEDDFLRREWLRPDQALFPWDKGQEEDAEEPGEQQKEKLKKKNVNALTLAEQTLVEEELRRLRTLGMSLKEKITIPKAGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMKLAHQIVEHRTRGLVIWRSGSYMWVYRGKNYQGPVESDATSMEKSEAVWWKGENMTPEEAEFNRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQLTNDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELMAQELKALTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVRCKALDSTPSGEDESTAQAGSLAEFYVAQACWGRDISTEERERMMQEVAKAKNAKLVKKIECKLAVAQAKRLRAEKLLAKIEASLLPVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRRPMTLRPRNLLTKAKALQRSIVMQRHEALSQHVTELGEKIEEMKKKLGLSQDLGTKDRWNVEDHNQIDHISEFTQSEEEYSDGDDTDG* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0352 706 Coils Coil 463 483 - -
Gso8g0352 706 Coils Coil 644 664 - -
Gso8g0352 706 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 3 706 IPR045278 GO:0000375|GO:0003729
Gso8g0352 706 ProSiteProfiles CRM domain profile. 146 242 IPR001890 GO:0003723
Gso8g0352 706 ProSiteProfiles CRM domain profile. 524 624 IPR001890 GO:0003723
Gso8g0352 706 SUPERFAMILY YhbY-like 314 406 IPR035920 -
Gso8g0352 706 SUPERFAMILY YhbY-like 148 239 IPR035920 -
Gso8g0352 706 MobiDBLite consensus disorder prediction 684 706 - -
Gso8g0352 706 SUPERFAMILY YhbY-like 525 623 IPR035920 -
Gso8g0352 706 Gene3D - 314 407 IPR035920 -
Gso8g0352 706 Gene3D - 525 625 IPR035920 -
Gso8g0352 706 Gene3D - 147 243 IPR035920 -
Gso8g0352 706 Coils Coil 408 428 - -
Gso8g0352 706 Pfam CRS1 / YhbY (CRM) domain 149 231 IPR001890 GO:0003723
Gso8g0352 706 Pfam CRS1 / YhbY (CRM) domain 315 399 IPR001890 GO:0003723
Gso8g0352 706 Pfam CRS1 / YhbY (CRM) domain 527 613 IPR001890 GO:0003723
Gso8g0352 706 PANTHER (CRM) DOMAIN PROTEIN, PUTATIVE-RELATED 3 706 - -
Gso8g0352 706 SMART CRS1_YhbY_2 148 231 IPR001890 GO:0003723
Gso8g0352 706 SMART CRS1_YhbY_2 315 399 IPR001890 GO:0003723
Gso8g0352 706 SMART CRS1_YhbY_2 526 613 IPR001890 GO:0003723
Gso8g0352 706 ProSiteProfiles CRM domain profile. 313 410 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0352 Gso-Chr8 3333192 3339303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0352 - - gmx:100776626 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0352 8 3333192 3339303 Gso7g0792 7 8720252 8726666 PCT
Gso8g0352 8 3333192 3339303 Gso9g1509 9 39350870 39359961 PCT
Gso7g0792 7 8720252 8726666 Gso8g0352 8 3333192 3339303 PCT
Gso9g1509 9 39350870 39359961 Gso8g0352 8 3333192 3339303 PCT