Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1508 ATGAGCGTGAAGAAAAGGGCATTTTCAATTAACATTGAAGAGGCTGCTGTGGACTTCTTCAACCATCTCTTGCAGGAGAAGCCTAGGATTCCAGTATTTGTTCCTTTGATTCTGATTGCTTGGGCAATTGAGAGATGGGTCTTCTCTGCCTCCACTTGGGTTCCTCTTGCACTTGCTGTCTGGACTACTATACAGTACGGGAGATACCAACGCAAACTGCTCGTGGAGGACTTGGATAAGAAATGGAAGCGAATCATACTGAATGTTTCGCCCATCACACCATTGGAGCACTGTGAGTGGCTGAATAAGTTGTTGACAGAAGTCTGGTCCAACTATTTTAATCCCAAGTTTTCAATAAGGATATCTGCTATAGTTGAGAAACGTTTAAAGCTCCGGAAACCAAGACTTCTAGAAAGAGTTGAACTGCAGGAGTTTTCACTGGGATCGTGCCCTCCTAGCTTGGCTTTGCAAGGGATGCGGTGGTCAACTATTGGTGATCAGAGATTTCTGCAACTGGGTTTCGACTGGGATACAAATGAAATGAGCATTTTGTTGCTTGCTAAGCTTGCAAAGCCATTGATTGGAACTGCTCGAATAGTGATTAACAGTCTTCATATCAAGGGTGATCTTCTTGCCTCACCAATTCTAGATGGAAAAGCACTTCTGTATTCTTTTGTATCAACTCCTGAAGTGAGAATAGGAGTTGCCTTTGGAAGCGGTGGAAGCCAATCACTTCCTGCCACTGAATGGCCTGGTGTTTCTTCTTGGCTGGAAAAACTTTTTACTGACACCTTGGCTAAAACCATGGTGGAACCTCGGCGTCGTTGTTTCACTTTACCTGCTGTTGATTTAAGGAAAAAAGCAGTTGGAGGCATTATATATATTAGAGTGATTTCAGCAAATAAACTTTCTAGGAGTTGCTTTAAGACATGTAGGAGGCAACCAAATGGTACATCCAATGGTTGTTCAGAGGATAATTTTGATGATAAGGACCTACAAACATTTGTAGAGGTAGAAATTGAAGAATTAACCAGGAGAACAGATGTCAGACTGGGTTCAACCCCCAGATGGGATGCACCATTTAATATGGTTTTACACGATAATGCAGGAACTCTTCGTTTCAATCTTTATGAGAGTTGTCCCAACAACGTGAGATGTGACTATCTAGCAAGTTGTGAAATCAAGTTGAGGCATGTGGAAGATGATTCAACGATAATGTGGGCAATAGGACCTGATTCTGGAGTCATAGCAAAGCAAGCACAGTTTTGCGGAGAAGAAATTGAAATGGTTGTCCCATTTGAGGGGCACAACTCAGGAGAGTTGAAGGTGAGCGTTGTAGTAAAAGAGTGGCAATATTCTGATGGTTCACATAGCTTGAACAGTCTCCGGAGTAGCAGCTCTCAGCAGTCAATTAATGGATCACCAAATTTTCAGTTAAGAACTGGAAGAAAAATTAATGTAACTGTTGTGGAAGGAAAGGATCTTGCTGCAAAAGACAAATCTGGAAAGTTTGACCCATACATCAAATTGCAGTATGGAAAGGTTGTCCAGAAAACAAGGACGGTTCATACTCCAAATCCTGTATGGAATCAGACGTTTGAATTCGATGAGATTGGTGGTGGGGAATACTTAAAATTAAAAGGCTTTTCAGAAGAAATTTTTGGAGATGAAAACATTGGTAGTGCACATGTGAATTTGGAAGGACTGGTTGAGGGCTCAGTCAGGGATGTATGGATCCCTCTTGAACGAGTGCGTTCTGGAGAATTAAGACTTCAAATATCAGTTAGAGCAGACGACCAAGAAGGATCAAAGGGCTCAGGTTTGGGCTTAGGAAATGGTTGGATTGAACTTGTTCTGATAGAGGGAAGGGATCTAGTTGCGGCCGATGTCAGAGGCACAAGTGATCCATTTGTGAGGGTACACTACGGAAATTTTAAGAAAAAGACAAAGGTCATATACAAAACTCTTAACCCTCAGTGGAACCAGACCTTAGAGTTCGCTGATGATGGAAGTCAACTAATGCTTTATGTCAAGGATCACAATGCATTGCTACCCACATCAAGTATAGGTGAATGTGTCGTAGAATATCAAAGGTTACCTCCAAACCAGATGGCCGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAAATTCACATCCAAATTACCAGAAAAGTTCCAGAGATGCAGAAGAGGCAAAGTCTAGACTCTGAACCTTCCTTGAGTAAACTACACCAAATTCCTATCCAGATAAAACAGATGATGATCAAGTTCAGGTCCTTCATAGAGGATGGAAATCTTGAAGGACTCTCTACAACATTGAGTGAGCTAGAAACTCTAGAGGATACACAGGAAGGGTATATAGTCCAGCTGGAGACTGAGCAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCCCTGAGCAGGAGATCTTCTTCAACTGGAAACTGA 2481 0.4208 MSVKKRAFSINIEEAAVDFFNHLLQEKPRIPVFVPLILIAWAIERWVFSASTWVPLALAVWTTIQYGRYQRKLLVEDLDKKWKRIILNVSPITPLEHCEWLNKLLTEVWSNYFNPKFSIRISAIVEKRLKLRKPRLLERVELQEFSLGSCPPSLALQGMRWSTIGDQRFLQLGFDWDTNEMSILLLAKLAKPLIGTARIVINSLHIKGDLLASPILDGKALLYSFVSTPEVRIGVAFGSGGSQSLPATEWPGVSSWLEKLFTDTLAKTMVEPRRRCFTLPAVDLRKKAVGGIIYIRVISANKLSRSCFKTCRRQPNGTSNGCSEDNFDDKDLQTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNAGTLRFNLYESCPNNVRCDYLASCEIKLRHVEDDSTIMWAIGPDSGVIAKQAQFCGEEIEMVVPFEGHNSGELKVSVVVKEWQYSDGSHSLNSLRSSSSQQSINGSPNFQLRTGRKINVTVVEGKDLAAKDKSGKFDPYIKLQYGKVVQKTRTVHTPNPVWNQTFEFDEIGGGEYLKLKGFSEEIFGDENIGSAHVNLEGLVEGSVRDVWIPLERVRSGELRLQISVRADDQEGSKGSGLGLGNGWIELVLIEGRDLVAADVRGTSDPFVRVHYGNFKKKTKVIYKTLNPQWNQTLEFADDGSQLMLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKRGEIHIQITRKVPEMQKRQSLDSEPSLSKLHQIPIQIKQMMIKFRSFIEDGNLEGLSTTLSELETLEDTQEGYIVQLETEQMLLLSKIKELGQEIINSSPSLSRRSSSTGN* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1508 826 PANTHER OS01G0128800 PROTEIN 1 819 - -
Gso9g1508 826 Pfam C2 domain 484 581 IPR000008 -
Gso9g1508 826 Pfam C2 domain 615 711 IPR000008 -
Gso9g1508 826 Pfam C2 domain 292 402 IPR000008 -
Gso9g1508 826 CDD C2 485 581 - -
Gso9g1508 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 594 IPR035892 -
Gso9g1508 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 611 724 IPR035892 -
Gso9g1508 826 Gene3D C2 domain 289 454 IPR035892 -
Gso9g1508 826 Gene3D C2 domain 470 597 IPR035892 -
Gso9g1508 826 Gene3D C2 domain 609 726 IPR035892 -
Gso9g1508 826 PANTHER PLANT SYNAPTOTAGMIN 1 819 - -
Gso9g1508 826 SMART C2_3c 614 708 IPR000008 -
Gso9g1508 826 SMART C2_3c 484 578 IPR000008 -
Gso9g1508 826 SMART C2_3c 292 408 IPR000008 -
Gso9g1508 826 ProSiteProfiles C2 domain profile. 585 709 IPR000008 -
Gso9g1508 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 328 405 IPR035892 -
Gso9g1508 826 CDD C2 615 711 - -
Gso9g1508 826 ProSiteProfiles C2 domain profile. 463 579 IPR000008 -
Gso9g1508 826 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 94 280 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1508 Gso-Chr9 39342133 39349928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1508 614 723 Lipid Metabolism Gene Families AT1G51570 29.508 1.78e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1508 - - gmx:100807475 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0793 7 8727709 8735401 Gso9g1508 9 39342133 39349928 GST
Gso8g0353 8 3341334 3348392 Gso9g1508 9 39342133 39349928 PCT
Gso9g1508 9 39342133 39349928 Gso8g0353 8 3341334 3348392 PCT