Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0353 ATGAGTAGTAGTAAGAAAAGGTTCATTCCTATTAATCTGGAAGATGCTGCAGTGGACTTGTTAAACCATGTGGTGAAGTTGAAGGAGAAGGGATGGATTCCACTCTTCATTCCACTCATTTTGATTGCTTGGGCTATTCACAGATGGCTCTTCTCTTTCTCCAATTGGCTTCCCCTTGTACTTGCTCTATGGGCATCTATGCAATATGGAAATTATCAGCGCAAACTACTTGAGGAAGAGTTGAATAAGAAATGGAAACGGATCCTACTCAACACCTCGCCCATGACACCATTAGAACACTGTGAGTGGTTGAATCTGCTATTGACACAAATTTGGTCCAACTATTTTAACCCAAAGTTCTCAAGAAGGTTAAAAGCCATAGTTGAGAAACGGTTAAAGCTCCGGAAACCAAGATTTATAGAAAAGGTTGAGGTCCAAGAGTTTTCACTTGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGATGCGATGGTCAACCTCTGGTGGTCAGCGAGTCCTCAAAACGAGTTTCGATTGGGACACGAGTGAAATGAGCATTTTGATGCTTGCTAAGCTTTCCGTTGGAACAGCCAGAATTGTGATTAACAGTCTTCATATTAAGGGTGATCTTCTGGTGACACCAATTCTAGATGGAAAAGCACTTTTGTATTCCTTTCTATCAATACCTGAGGTGAAAATAGGAATTGCCTTTGGAAGTGGAGCAAGCCAATCAGCCACTGAGTTTCCTGGTGTTTCTTCATGGCTGAATAAACTTTTTACTGATACCTTAGCTAAAACCATGGTGGAACCTCGCCGTCGTTGTTTCAGTTTGCCTGTGGTTGATTTGAGGAAAACTGCTGTTGGAGGCATTATATATGTGTCAGTGATTTCAGCAAACAAACTTTCTAGGAGTTGCTTCAAGAGTAGCCCATCTTTGAGGCAACAAAATAGCACAATCAATGGATATTCAGAAAACAACCTGGATGACAATGACCTACAGACATTTGTAGAGGTAGAAGTGGAGGAATTGACAAGGAGGACGGGTCTGAGCCATGGTTCAAATCCAATGTGGGATACAACATTTAATATGGTTTTACATGATAATACAGGAATTGTTCGCTTCAATCTTTATGAGTGTCCCTCAAGTGGTGTTAAGTGTGACCACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAATAGGACCTGATTCTAGTGCAATAGCAAAGCATGCAAAGTTTTGCGGAGATGAAGTTGAAATGGTTGTCCCATTTGAGGGGACCAACTCAGTAGAGTTAAAGGTGAAGTTTGTAGTAAAAGAGTGGCAGTTTTCTGATGGTTCGCATAGCTTGAACAGCCTCCGTTCTAATTCTCAGCGATCACTTATTGGATCATCAAGTCTTCTGTCAAAAACTGGAAGGAAACTTAAGATAACTGTTGTAGAAGCAAAGGATCTCGCTGCAAAAGACAAATCTGAAAAAATTAACCCATACATTAAATTGCTATATGGAAAGGTTGTCAAGAAAACAAAGGTTGCTCTTACTACTACTAGTACTACTACAAATCCTGTCTGGAATCAATCATTTGAATTTGATGAGAATGATGGTGATGAATACCTAAATGTAAAATGCTTTAGTGAAGAAATTTTTGGAGATGAAAATATTGGTAGTGCAAATGTAAATTTGGAAGGACTGGGGGATGGGTCAATCAAGGTTGAATGGATCCCTCTTGAAGGAGTGAGTTCGGGTGAATTGAAGCTTAAAATTGAAGTAGTTAAGGTGGAGGACCAAGAAGGATCAAGGGGTTCAACTAATGGTTGGATAGAACTTGTTGTGATTGAAGCGAGGGATCTTATTGCTGCTGATCTTCGAGGGACAAGTGATCCTTATGTGAGGGTAAACTACGGAAACTCGAAGAAAAGGACAAAGGTTATACACAAAACACTCAACCCTCGTTGGAACCAGACATTAGAGTTCCTTGACGATGGCAGTCCCTTGATACTGCATGTTAAGGACCACAATGCTTTACTACCCGAATCAAGTATAGGCGAAGGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAGATGTCTGACAAGTGGATACCTCTGCAAGGGGTGAAAAGTGGTGAGATCCACATCCAAATTACAAGAAAAGTTCCAGAAATGCAAACAAGACATACTCTAGACTCTCAACCCTCTTCGTTAAGTAAATCACACCAAATTCCTACCCAGATGAGAGAGATGATGAAAAAGTTTCGATCATTAATAGAGGATGAAAATCTTGAAGGATTAACAACAACTTTGAGTGAGTTAGAAAGTCTAGAGGATACACAGGAAGGGTATATAACACAGTTGGAGACAGAGCAAATGCTTCTACTCAGCAAAATAAATGAACTGGGTCGGGAGATCATCAATTCTTCTTCCCGCGCTAGTAGTAGTCCTTCTCAAAGTGGAATTTGA 2487 0.4049 MSSSKKRFIPINLEDAAVDLLNHVVKLKEKGWIPLFIPLILIAWAIHRWLFSFSNWLPLVLALWASMQYGNYQRKLLEEELNKKWKRILLNTSPMTPLEHCEWLNLLLTQIWSNYFNPKFSRRLKAIVEKRLKLRKPRFIEKVEVQEFSLGSCPPSLGLQGMRWSTSGGQRVLKTSFDWDTSEMSILMLAKLSVGTARIVINSLHIKGDLLVTPILDGKALLYSFLSIPEVKIGIAFGSGASQSATEFPGVSSWLNKLFTDTLAKTMVEPRRRCFSLPVVDLRKTAVGGIIYVSVISANKLSRSCFKSSPSLRQQNSTINGYSENNLDDNDLQTFVEVEVEELTRRTGLSHGSNPMWDTTFNMVLHDNTGIVRFNLYECPSSGVKCDHLASCEIKMRHVEDDSTIMWAIGPDSSAIAKHAKFCGDEVEMVVPFEGTNSVELKVKFVVKEWQFSDGSHSLNSLRSNSQRSLIGSSSLLSKTGRKLKITVVEAKDLAAKDKSEKINPYIKLLYGKVVKKTKVALTTTSTTTNPVWNQSFEFDENDGDEYLNVKCFSEEIFGDENIGSANVNLEGLGDGSIKVEWIPLEGVSSGELKLKIEVVKVEDQEGSRGSTNGWIELVVIEARDLIAADLRGTSDPYVRVNYGNSKKRTKVIHKTLNPRWNQTLEFLDDGSPLILHVKDHNALLPESSIGEGVVEYQRLPPNQMSDKWIPLQGVKSGEIHIQITRKVPEMQTRHTLDSQPSSLSKSHQIPTQMREMMKKFRSLIEDENLEGLTTTLSELESLEDTQEGYITQLETEQMLLLSKINELGREIINSSSRASSSPSQSGI* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0353 828 ProSiteProfiles C2 domain profile. 462 583 IPR000008 -
Gso8g0353 828 ProSiteProfiles C2 domain profile. 589 710 IPR000008 -
Gso8g0353 828 SMART C2_3c 483 582 IPR000008 -
Gso8g0353 828 SMART C2_3c 290 408 IPR000008 -
Gso8g0353 828 SMART C2_3c 615 709 IPR000008 -
Gso8g0353 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 613 725 IPR035892 -
Gso8g0353 828 Gene3D C2 domain 603 727 IPR035892 -
Gso8g0353 828 Gene3D C2 domain 473 602 IPR035892 -
Gso8g0353 828 CDD C2 484 585 - -
Gso8g0353 828 Pfam C2 domain 616 712 IPR000008 -
Gso8g0353 828 Pfam C2 domain 483 585 IPR000008 -
Gso8g0353 828 Pfam C2 domain 290 402 IPR000008 -
Gso8g0353 828 CDD C2 616 712 - -
Gso8g0353 828 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 97 278 IPR031468 GO:0008289
Gso8g0353 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 482 603 IPR035892 -
Gso8g0353 828 PANTHER PLANT SYNAPTOTAGMIN 1 826 - -
Gso8g0353 828 PANTHER OS01G0128800 PROTEIN 1 826 - -
Gso8g0353 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 286 404 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0353 Gso-Chr8 3341334 3348392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0353 484 789 Lipid Metabolism Gene Families AT3G61300 24.854 4.17e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0353 - - gmx:100805496 1558.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0353 8 3341334 3348392 Gso7g0793 7 8727709 8735401 PCT
Gso8g0353 8 3341334 3348392 Gso9g1508 9 39342133 39349928 PCT
Gso7g0793 7 8727709 8735401 Gso8g0353 8 3341334 3348392 PCT
Gso9g1508 9 39342133 39349928 Gso8g0353 8 3341334 3348392 PCT