Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1295 ATGAATAAGATCTTCAGATTTTGTTACAGTTTTTCAAATTATTCTGTGGCAAGGAGAGAAGAAAAGATCATAGAAAGTGGTGATTCTTCGAATATTGAAGAGAAAAATATGGGGTTGAGATTGAAGGAGACATTCTACTTGTCCCATGGAGCACCAACTCTTGCCGTAGATGATTCAATCCCTGCGTGGAACTTCTTCAATTCGTGGAAGGAGCAGTTTCCGACGAGACCCTCTTCCATTCTTATTATCTCCGCCCACTGGGACACCCATGTTCCCACCGTCAACGTCGTTCACCAGAATGATACCATCTACGACTTCTATGGCTTCCCCAAATCCATGTACAAGCTGAAGTATCCAGCACCAGGGGCTCCACACTTAGCAAAGAGGGTGAAGGAGCTACTCTTAGGATCAGGGTTTAGCCATGTGGATGAAGATAAGAAACGTGGGCTTGACCATGGTGCATGGGTGCCACTCTTGTTGATGTACCCAGAGGCAGACATCCCAGTGTGTCAACTCTCTATTTCATCAAACAAAGGTGGTACCTATCACTACAACATGGGAAAGGCTTTGGCTCCTCTTAAGGATGAGGGTGTTCTTATCGTTGGGTCTGGGAGTGCCACCCACAACCTCAGAGCAATTGCACCTCGTGGTACCCCACCTGCTCCATGGGCTTCCGCATTTATGTCCTGGCTAAAAACCTCTCTTCTTGATGGAAGATACGAGGAAGTAAATGAATACGAAGAGAAGGCCCCATATGCAAAAATGGCTCATCCCTGGCCAGATCACTTCTTCCCATTGCATGTGGCCATGGGAGCTGCTGGTGAAAATTCAAAGGCCAAAGTTGTACATGATAGTTGGGATGGTGGTTCTATGTCTTATGCTTCTTTCGGTTTTACAACAGCTGACAGTTGA 912 0.4616 MNKIFRFCYSFSNYSVARREEKIIESGDSSNIEEKNMGLRLKETFYLSHGAPTLAVDDSIPAWNFFNSWKEQFPTRPSSILIISAHWDTHVPTVNVVHQNDTIYDFYGFPKSMYKLKYPAPGAPHLAKRVKELLLGSGFSHVDEDKKRGLDHGAWVPLLLMYPEADIPVCQLSISSNKGGTYHYNMGKALAPLKDEGVLIVGSGSATHNLRAIAPRGTPPAPWASAFMSWLKTSLLDGRYEEVNEYEEKAPYAKMAHPWPDHFFPLHVAMGAAGENSKAKVVHDSWDGGSMSYASFGFTTADS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1295 303 SUPERFAMILY LigB-like 44 298 - -
Gso9g1295 303 Gene3D - 33 299 - -
Gso9g1295 303 CDD 45_DOPA_Dioxygenase 44 298 IPR014436 GO:0008270|GO:0016701
Gso9g1295 303 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 40 303 - -
Gso9g1295 303 PIRSF Doxgns_DODA 37 300 IPR014436 GO:0008270|GO:0016701
Gso9g1295 303 PANTHER UNCHARACTERIZED 40 303 - -
Gso9g1295 303 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 44 298 IPR004183 GO:0006725|GO:0008198|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1295 Gso-Chr9 36527645 36531764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1295 K15777 - gmx:100810694 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1664 16 37266300 37269646 Gso9g1295 9 36527645 36531764 GST