Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1664 ATGAATATGGGGTTGAAATTGAAGGAGACGTTCTACTTGTCCCATGGAGCACCAAGTCTAGTCATAGATGATTCAATCCCTGCGTGGCACTTCTTCAATTCCTGGAAGGAGCAGTTTCCGACGAAACCCTCTTCCATTCTTGTTATCTCCGCCCACTGGGACACCCATGTTCCCACCGTCAACGTCGTTGACCAAAATGACACCATCTACGACTTCTCTGGCTTCCCCAAATCCATGTACAAGCTCAAGTATCCAGCACCAGGAGCTCCACAGTTGGCAAAGAGGGTGAAGGAGCTTCTCTTAGGATCAGGATTTAGCCATGTGGATGAAGATAAGAAACGTGGGCTTGACCATGGTGCATGGGTGCCTCTCTTTTTGATGTACCCAGAGGCAGACATCCCTGTGTGTCAACTCTCTATTTCATCAAACAAAGGTGGTACCTATCACTACAACATGGGAAAGGCTTTGGCCCCTCTTAAGGATGAGGGTGTTCTCATCATTGGTTCTGGGAGTGCCACCCACAACCTCAGAGCTATGGCACCTCGTGGTTCTCCACCTGCTCCTTGGGCTTCCGCATTTATGTCCTGGCTAGAAACCTCTCTTCTTGATGGAAGATACGAGGAAGTAAATGAATTCGAAGAGAAGGCCCCATATGCAAAAATGGCTCATCCCTGGCCAGATCACTTCTTCCCATTGCATGTGGCCATGGGAGCTGCTGGTGAAAATGCAAAGGCCAAAGTTGTACATGATAGTTGGGATGCTGGTTCTATCTCTTATGCTTCTTTCGGTTTTACAACAGCTAAAAGTTGA 810 0.479 MNMGLKLKETFYLSHGAPSLVIDDSIPAWHFFNSWKEQFPTKPSSILVISAHWDTHVPTVNVVDQNDTIYDFSGFPKSMYKLKYPAPGAPQLAKRVKELLLGSGFSHVDEDKKRGLDHGAWVPLFLMYPEADIPVCQLSISSNKGGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAMAPRGSPPAPWASAFMSWLETSLLDGRYEEVNEFEEKAPYAKMAHPWPDHFFPLHVAMGAAGENAKAKVVHDSWDAGSISYASFGFTTAKS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1664 269 CDD 45_DOPA_Dioxygenase 10 264 IPR014436 GO:0008270|GO:0016701
Gso16g1664 269 PANTHER UNCHARACTERIZED 6 269 - -
Gso16g1664 269 Gene3D - 4 265 - -
Gso16g1664 269 SUPERFAMILY LigB-like 10 264 - -
Gso16g1664 269 PIRSF Doxgns_DODA 3 266 IPR014436 GO:0008270|GO:0016701
Gso16g1664 269 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 264 IPR004183 GO:0006725|GO:0008198|GO:0016491
Gso16g1664 269 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 6 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1664 Gso-Chr16 37266300 37269646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1664 K15777 - gmx:100797161 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1664 16 37266300 37269646 Gso16g1664 16 37266300 37269646 ECH
Gso16g1664 16 37266300 37269646 Gso9g1295 9 36527645 36531764 GST