Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1259 ATGACCCAGTCCCGGAAGCCCAGAAAGCCCAACCCGCAAGCCCGCGAAGCCCAAGAGAGCCCTTCTTCTTCATTCTCCAGCAGCGGCATGAAACTCATCGTCCCCCTCCAGGGCGTGGTGCAGGGCCGCGGAGGGCTTCTCCTCGGGACCCTCGTCCCCTGCACGCTCTTCTACTTCCTCCAGCTCTACCTCAAACGACGCCGTTCCAACTTCTCCCCTCCCTCCCCCTCTTCTTCCGAATCCACCCTCCCCCGCACCTCCTCCCGCTCCAATTTGTCGACGCGTGGCTCCATTTCCCGCGTCCGCGTCTCCAAGCTCGCCACGTCGATTTCCAAACCCGACGAGTCACTCTATTACGTAGGGTTGGAGAGGGTCTCGCGAGATCCCTACGATGCATTGGAGAATCCCAATGGGATTATTCAGTTGGGCTTGTCGGATAACAAGCTGTGCTTGGATTTGATAGGGGAATGGGTGGCGCGGAACTTGGAAGGTTCCATCAGTGGTGGTGTTGGTTTGGGAATCAATGGGATTGTGCCGTATCAGTCGTTTGATGGGGTGATGGAATTGAAAATGGCTTTGTCAGATTTTATGCATCAGGTGATGGGTGGATCCGTGAAATTTGACCCATCTAACATGGTACTAACAGCTGGGGCAACTCCTGCTATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCAGGCTTTGACAGAGATGTAAGGTGGCGTCCTGGGGTAGACCTAATACCTGTTCACTGTCGCAGTACTGACAATTTCGATTTAAATATCACTGCTCTTGAACAAGCATTTAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGTGGAATTCTAATTTCCAACCCTTCAAATCCTGTTGGCAATATGATGACACAAGACATGCTTTACAGTCTTCTAGACTTTGCTGAAGAGAAAAATATTCATATCATTGCTGATGAAGTATTTGCAGGCTCCACATATGGAAGTGAGAAGTTTGTGAGCGTAGCTGAAATTCTTGATTCAGATTATATAGACAAGAGCCGGGTTCATATAATATATGGTCTATCAAAAGACCTCTCGCTTGCTGGCTTTAGAGTGGGGGTTATATGTTCATTCAATGAGAGTGTTTTGGCAGCTGCCAAGAAGTTGAGTAGATTTTCCTCTATATCTGCTCCAACCCAGAGGTTAGTTACTTCAATGCTTTCAGATAAAAGATTTATTCAGGAGTACTTTGAAACCAACCGGAAAAGAATACGACAAATGCATGATGAATTTGTGGGTTGTTTAAGTAAACTAGGAATCAAGTGTGCCAAGAGCAGTGCTGGTATGTACTGTTGGGTTGATATGAGTGGATTAATCCGACCTTATAGTGAGAAAGGAGAAATTGAATTATGGGAGAAGTTTTTGAGTGTTGCCAAGATCAATATAACTCCTGGGTCAGCCTGTCATTGCATAGAACCAGGATGGTTTCGGATTTGTTTTACCACTATAACATTAGAGGAGATCCCTATGGTTATTGATCGAATTAGGAGAGTTGTTGAAAGTTGTAATTTTTCTAGTTGA 1590 0.461 MTQSRKPRKPNPQAREAQESPSSSFSSSGMKLIVPLQGVVQGRGGLLLGTLVPCTLFYFLQLYLKRRRSNFSPPSPSSSESTLPRTSSRSNLSTRGSISRVRVSKLATSISKPDESLYYVGLERVSRDPYDALENPNGIIQLGLSDNKLCLDLIGEWVARNLEGSISGGVGLGINGIVPYQSFDGVMELKMALSDFMHQVMGGSVKFDPSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCRSTDNFDLNITALEQAFSQARKRGVKVRGILISNPSNPVGNMMTQDMLYSLLDFAEEKNIHIIADEVFAGSTYGSEKFVSVAEILDSDYIDKSRVHIIYGLSKDLSLAGFRVGVICSFNESVLAAAKKLSRFSSISAPTQRLVTSMLSDKRFIQEYFETNRKRIRQMHDEFVGCLSKLGIKCAKSSAGMYCWVDMSGLIRPYSEKGEIELWEKFLSVAKINITPGSACHCIEPGWFRICFTTITLEEIPMVIDRIRRVVESCNFSS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1259 529 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 363 376 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gso9g1259 529 Gene3D - 162 412 IPR015421 GO:0003824
Gso9g1259 529 MobiDBLite consensus disorder prediction 70 96 - -
Gso9g1259 529 SUPERFAMILY PLP-dependent transferases 112 523 IPR015424 -
Gso9g1259 529 CDD AAT_like 180 520 - -
Gso9g1259 529 Pfam Aminotransferase class I and II 141 518 IPR004839 GO:0009058|GO:0030170
Gso9g1259 529 PANTHER AMINOTRANSFERASE ACS12-RELATED 19 526 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 168 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 174 190 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 211 231 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 254 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 287 311 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 323 346 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 357 381 - -
Gso9g1259 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 389 412 - -
Gso9g1259 529 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 19 526 - -
Gso9g1259 529 MobiDBLite consensus disorder prediction 1 28 - -
Gso9g1259 529 Gene3D Aspartate Aminotransferase, domain 1 128 515 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1259 Gso-Chr9 36040604 36044658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1259 K14270 - gmx:100811906 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1629 16 36950972 36954669 Gso9g1259 9 36040604 36044658 GST