LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g1208	ATGATGAGGATGAAGAATATTAGTAGTAGCATCATGAATGGAGGTGGTTCAGTTGGTTGTAGATCTGAGCCGGGTTCAAAGGAATGGGAGATGAGGCCAGGTGGAATGTTGGTTCAGATGAGAACTGCTGATTCGGGTCGGAACCCAGCACTTTTGCCAACAATTAGAGTAAAGGTCAAGTTTGGTTCAATTTACCATGAAGTCAACATTAGTTCCCAAGCTACATTTGGGGAGTTGAAGAAAATGCTGTCAGGGCTAACTGGTTTACACCATGAAGACCAAAAGCTGTTTTACAAAGACAAGGAGAGGGATTCAAAGGCTTTTCTTGACATAGTTGGGGTGAAGGACAAATCCAAGATAGTGCTAGTGGAAGACCCTATTAGTCAAGAAAAGAGGTTGTTAGAGAGAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGGAGGGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAGATGTGCTTAATCTGATTGAGTTATTGATGAATCAATTGCTTAAATTGGATGGTATAATGGCTGATGGGGATGTGAAACTACAGAGGAAAATGCAGGTAAGAAGAGTTCAAAAGTATGTTGAAACTCTTGATGTGCTGAAAGTTAAGAATTCTATGCCTAGTAGCAATGGAGACCAAGCCCCAGTGAAGCCCCATCAGAAGCATTCAAATGGTCAAAGGAAGGGACCAATTCAAGAGCAACAACAAAAGCATTCAAATGGACGTCATAGATTAGCCTTAGCACCAATTCAGGAGCAGCAACAAGAACAACCAAGGAACTCAAGTGAGAATTCTCTAGCACTATATCAAGAGCAACAAGAACAACCCTCAAGGAATTCCACCTCAGGAGTTGTAGTTACCACAAATTGGGAGTTGTTTGATTCTGTCCCACCATTAATCCCTGTGCAAGCCACATCACCACCCCCACCCTCCTCAGTGACCAATAATTCAGGTCCTCCCAAGTTCAATTGGGAATTCTTCGACTAA	1062	0.4247	MMRMKNISSSIMNGGGSVGCRSEPGSKEWEMRPGGMLVQMRTADSGRNPALLPTIRVKVKFGSIYHEVNISSQATFGELKKMLSGLTGLHHEDQKLFYKDKERDSKAFLDIVGVKDKSKIVLVEDPISQEKRLLERRKNAKMEKAAKSISEISLEVDRLAGRVSAFESIISKGGKVVETDVLNLIELLMNQLLKLDGIMADGDVKLQRKMQVRRVQKYVETLDVLKVKNSMPSSNGDQAPVKPHQKHSNGQRKGPIQEQQQKHSNGRHRLALAPIQEQQQEQPRNSSENSLALYQEQQEQPSRNSTSGVVVTTNWELFDSVPPLIPVQATSPPPPSSVTNNSGPPKFNWEFFD*	354

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso9g1208	353	Gene3D	-	54	124	-	-
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	326	340	-	-
	Gso9g1208	353	PANTHER	BCL2-ASSOCIATED ATHANOGENE	5	333	IPR039773	GO:0051087
	Gso9g1208	353	SUPERFAMILY	BAG domain	108	230	IPR036533	GO:0051087
	Gso9g1208	353	Pfam	Ubiquitin family	55	123	IPR000626	GO:0005515
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	1	28	-	-
	Gso9g1208	353	Gene3D	BAG domain	125	230	IPR036533	GO:0051087
	Gso9g1208	353	ProSiteProfiles	BAG domain profile.	148	226	IPR003103	GO:0051087
	Gso9g1208	353	SMART	BAG_1	148	226	IPR003103	GO:0051087
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	275	308	-	-
	Gso9g1208	353	ProSiteProfiles	Ubiquitin domain profile.	53	123	IPR000626	GO:0005515
	Gso9g1208	353	Pfam	BAG domain	149	223	IPR003103	GO:0051087
	Gso9g1208	353	PANTHER	BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3	5	333	-	-
	Gso9g1208	353	SUPERFAMILY	Ubiquitin-like	47	129	IPR029071	-
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	228	308	-	-
	Gso9g1208	353	CDD	Ubl_AtBAG1_like	54	123	-	-
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	326	353	-	-
	Gso9g1208	353	MobiDBLite	consensus disorder prediction	228	261	-	-
	Gso9g1208	353	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	20	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g1208	Gso-Chr9	34794412	34796643	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g1208	-		-	gmx:100790513	672.544

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso16g1588	16	36429408	36432033	Gso9g1208	9	34794412	34796643	GST