Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1588 ATGATGAAGATGAAGAATATTAGTAGTAGCAATAATAATAATAGGACAAATGGTCTTTCTTCCATCATGAATGGAGGAGGCTCAGGTGGTTGTAGATCTGAGCCTGGTTCCAAGGAATGGGAGATGAGGCCAGGTGGAATGCTGGTTCAGATGAGAACTGCTGACTCTGATCGGAACCCAGCACTTGTGCCCACAATTAGAGTTAGGGTCAAGTATGGTTCAATTTACCATGAAGTCAACATTAGTTCACAAGCTACATTTGGGGAGTTGAAGAAAATGCTGTCTGGGCCAACTGGGTTACACCATGAAGATCAAAAGCTGTTATACAAAGACAAGGAGAGGGATTCAAAGGCTTTTCTTGACATGGTTGGGGTGAAGGACAAATCCAAGATAGTGCTAATGGAAGACCCTATTAGTCAAGAGAAGAGGTTGTTAGAGAGAAGAAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAGATGTGCATAATCTGATTGAGTTATTGATGAATCAGTTGCTCAAATTGGATGGTATAATGGCTGATGGGGATGTGAAACTACAAAGGAAGATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTTGATGTGCTGAAAGTTAAGAATTCTATGCCTAGTAGCAATGGAGACCATGCCCCAGTGCAGCCTCAACAGAAGCATTCAAATGGGCAACAACAAAAGCATTCAAATGGACATCATAGATTAGCCTTAGTACCAATTCAGGAGCAGCAACAAGAACAACCAAGGAACTCAAATGAGAATTCTCTGGAACTATACCAAGAGCAACAACACCAACCCTCAAGGAATTCCACCTCAGGAGTTGTAGTTACCACAAATTGGGAGTTGTTTGATTCTGTCCCACCATTAATCCCTGTGCAATCCACATCCCCACCCTCCTCAGTGACCAATAATTCAGGTCCTCCCAAGTTCAATTGGGAATTCTTCGACTAA 1065 0.4197 MMKMKNISSSNNNNRTNGLSSIMNGGGSGGCRSEPGSKEWEMRPGGMLVQMRTADSDRNPALVPTIRVRVKYGSIYHEVNISSQATFGELKKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLMEDPISQEKRLLERRKNAKMEKAAKSISEISLEIDRLAGRVSAFESIISKGGKVVETDVHNLIELLMNQLLKLDGIMADGDVKLQRKMQVKRVQKYVETLDVLKVKNSMPSSNGDHAPVQPQQKHSNGQQQKHSNGHHRLALVPIQEQQQEQPRNSNENSLELYQEQQHQPSRNSTSGVVVTTNWELFDSVPPLIPVQSTSPPSSVTNNSGPPKFNWEFFD* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1588 354 Gene3D BAG domain 136 241 IPR036533 GO:0051087
Gso16g1588 354 Pfam Ubiquitin family 76 134 IPR000626 GO:0005515
Gso16g1588 354 ProSiteProfiles BAG domain profile. 159 237 IPR003103 GO:0051087
Gso16g1588 354 SMART BAG_1 159 237 IPR003103 GO:0051087
Gso16g1588 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Gso16g1588 354 Gene3D - 65 135 - -
Gso16g1588 354 SUPERFAMILY BAG domain 119 241 IPR036533 GO:0051087
Gso16g1588 354 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 341 - -
Gso16g1588 354 MobiDBLite consensus disorder prediction 1 41 - -
Gso16g1588 354 ProSiteProfiles Ubiquitin domain profile. 64 134 IPR000626 GO:0005515
Gso16g1588 354 MobiDBLite consensus disorder prediction 1 27 - -
Gso16g1588 354 MobiDBLite consensus disorder prediction 333 347 - -
Gso16g1588 354 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 341 IPR039773 GO:0051087
Gso16g1588 354 MobiDBLite consensus disorder prediction 280 311 - -
Gso16g1588 354 MobiDBLite consensus disorder prediction 240 268 - -
Gso16g1588 354 CDD Ubl_AtBAG1_like 65 134 - -
Gso16g1588 354 MobiDBLite consensus disorder prediction 328 354 - -
Gso16g1588 354 Pfam BAG domain 160 234 IPR003103 GO:0051087
Gso16g1588 354 SUPERFAMILY Ubiquitin-like 55 140 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1588 Gso-Chr16 36429408 36432033 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1588 - - gmx:100819022 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1588 16 36429408 36432033 Gso16g1588 16 36429408 36432033 ECH
Gso16g1588 16 36429408 36432033 Gso9g1208 9 34794412 34796643 GST