Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1161 ATGTATTACTTCCCCCCCTCAAGTGGACTAAAATTCAATTCCAAGGAGGTATTTCGTTATCTTGACAATGTTCAGAACAAAGTCAGCATCCAGAAAATCTCTCCTAATATTATAGTTGAGAAAGCTATTGTGGAAGGGTTACCACCAGGATGGGTGAAAAAGACCAGAATCACAACAAATGGAGATTCAGTTAGAAGAGATACGTTCTACATTGACCCTGTAAATGGGTATACATTCTGCTCAATAGAAGATGTTGATCACTATCTTGAAACTGGGAAGATAGGAAGGAATGAATTCACGTCAAAAGATAAAGATGGCAGTGATATGGAGTTAAAAGCTGACAAATCTCCTTCAAGAAGTGTAACCATGAAACCAACATTATCAGTTAGCAAGGGTCAAAGCTCAGATTTGGACATGATAGCTAATGACCAACAGATTCCAAGATCTGCAAGTTCTGAAGAATATTTGGATGTGCCCATTTCTGAATGTATATCCAATCAGTGTGTGGTGGGGGCTGAACTGACCAATTTAGTTATATCACGGGCTGAAAGTTCAGATCAGAAACAAGGGAAGTTTGGTTTAGCTCAAAGCGCTTCAGTTTCAGGTTGCACTAACAAAGATGTTGAAGAAAAGCAACTTCAAGAAAATTCAGAGACAAAACATGGCGCTGCAAAGGCCCAGGCCCAAGATCACCAGTGGCAAAACAAGCACAAGAAAGAGATCAATTTGCCTCACCGTGCTTCAAAGCGTCTTGCTGGAATTAAGGTTGGTCCTGTTCCAGAACTTAAAACAAGAAATCGAGCACGTCGTGTTGCAATTAAACAATCAGATAAGGAAGAAACCATCATCATAAATGTGGATAAATCTCCCAACAGCTTGTCTGGTGATCTAGCAAAACAGAAATTAAGTGGCACAGATACTGAGAAGACTCTAGAAGTGCAAATAAGTGACAAGGATAAAAAATGCTTCTCTTTTTCACCTCTGGAGAACAATGCTACTGTGGAAGAGTGTGCAAGAGTCCTTGAAAATGGAGATAAAGTTGATGCAAAGTTAGATTACACCCTTGACTTTCCCCTTGGAGAACTACTAACAGACCCATGTATTGCATTTGCAATTCAAACTCTCACTGGAGTAACATTTGAAGCCTCCAAAAACTCGCAAACTTCTTCCAACTTAAGAAACAGCCAGCATTCCAAAACTTCTGCTCCCACCCTCGCCAGTGGCAAAGGCGATGATAAGAAAAGCAATGATGGATTAGGTGACCGTGTGTTATCATCTCTAGAGAACCTTGCTATTCCAAAAGAACATGCCGGTGATGACAAAACTGATTCAAAGGCCAAGAATGAGAATGCAGGACCATCTTCTGAAAAGACACTTGACATGTCATGGATGGATCCATGCATTGAATTTGCAATAAAAACACTCACTGACACCATCCCATCAGACTCTGCTGATCAAAATCCCAAGAACTGCATCCAATTGTCAAGTGTCTGTTTAGATAACATTTACCAAACTGACTACTCTTGCAGACAATACTTTGGCACACAGAAACCAATGTTTCATAAACAGTCTTTTGTGGATCCATCACTGCAGCACACTAGAAATATTGGTATTGTAAATTCTGCTGCTGAAGCCAGACTCTAA 1644 0.4021 MYYFPPSSGLKFNSKEVFRYLDNVQNKVSIQKISPNIIVEKAIVEGLPPGWVKKTRITTNGDSVRRDTFYIDPVNGYTFCSIEDVDHYLETGKIGRNEFTSKDKDGSDMELKADKSPSRSVTMKPTLSVSKGQSSDLDMIANDQQIPRSASSEEYLDVPISECISNQCVVGAELTNLVISRAESSDQKQGKFGLAQSASVSGCTNKDVEEKQLQENSETKHGAAKAQAQDHQWQNKHKKEINLPHRASKRLAGIKVGPVPELKTRNRARRVAIKQSDKEETIIINVDKSPNSLSGDLAKQKLSGTDTEKTLEVQISDKDKKCFSFSPLENNATVEECARVLENGDKVDAKLDYTLDFPLGELLTDPCIAFAIQTLTGVTFEASKNSQTSSNLRNSQHSKTSAPTLASGKGDDKKSNDGLGDRVLSSLENLAIPKEHAGDDKTDSKAKNENAGPSSEKTLDMSWMDPCIEFAIKTLTDTIPSDSADQNPKNCIQLSSVCLDNIYQTDYSCRQYFGTQKPMFHKQSFVDPSLQHTRNIGIVNSAAEARL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1161 547 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 37 104 IPR001739 GO:0003677
Gso9g1161 547 Pfam Methyl-CpG binding domain 47 93 IPR001739 GO:0003677
Gso9g1161 547 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 2 543 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 386 405 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 119 135 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 386 459 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 97 117 - -
Gso9g1161 547 PANTHER OS04G0193200 PROTEIN 2 543 IPR038945 -
Gso9g1161 547 MobiDBLite consensus disorder prediction 185 207 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 185 234 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 433 447 - -
Gso9g1161 547 MobiDBLite consensus disorder prediction 97 135 - -
Gso9g1161 547 Gene3D - 37 135 - -
Gso9g1161 547 SUPERFAMILY DNA-binding domain 44 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1161 Gso-Chr9 33275894 33280840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1161 - - gmx:121172754 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1557 16 36139653 36145079 Gso9g1161 9 33275894 33280840 GST