Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1121 ATGGGAACATCAGTGCAAGTAACGCCACTGTGTGGAGTGTACAATGAGAACCCTCTCTCGTATTTGGTCTCCATTGATGGCTTCAACTTCCTCGTCGACTGTGGCTGGAACGACCACTTCGACCCTTCCCACCTTCAACCCCTCGCCAGGGTAGCATCAACCATAGATGCTGTTTTGCTTTCACATGCGGATACACTTCACCTTGGTGCCCTTCCATATGCCATGAAGCGGCTTGGACTTTCTGCCCCGGTTTATTCAACGGAGCCTGTCTACAGATTGGGCCTTCTCACTATGTATGACCAGTACCTCTCAAGAAAGCAAGTGTCGGAGTTCGATCTGTTCACGCTCGATGATATTGATTCTGCTTTCCAGAGTGTAACGAGGCTAACATATTCTCAGAATCATCATTTCTCAGGCAAGGGAGAAGGGATAGTGATTGCACCTCATGTTGCTGGACATCTTCTGGGAGGTACTATTTGGAAAATTACAAAGGATGGTGAGGATGTCATATATGCTGTTGATTTTAATCATAGGAAAGAAAGGCATTTGAATGGAACTGTTCTAGGTTCTTTTGTGCGTCCAGCTGTTCTAATAACTGATGCTTACAATGCTTTGAACAATCAGCCTTACAGACGTCAAAATGACAAAGAATTTGGAGATATCTTAAAGAAGACTCTAAGGGCAGGTGGCAATGTATTACTACCTGTTGACACAGTTGGACGAGTGTTGGAACTTATTCTGATGTTGGAATTGTATTGGGCAGATGAAAACTTGAACTACCCTATATATTTTCTTACATATGTTGCATCCAGCACAATTGATTATGTGAAGAGTTTCCTTGAGTGGATGAGTGATACCATAGCAAAGTCTTTTGAAAAAACTCGTGAAAATATATTTCTTTTGAAGTATGTCACCCTTCTGATTAACAAGACTGAGCTTGACAATGCTCCAGATGGCCCAAAGGTTGTTCTAGCATCCATGGCAAGTTTGGAAGCAGGCTTTTCTCATGATATATTTGTTGAGTGGGCCAACGATGTAAAAAATCTTGTCCTTTTTACCGAAAGAGGCCAGTTTGCCACACTAGCTCGTATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCGTTGTGTCCAAGCGTGTGCCTTTGGTTGGGGAAGAGCTAATCGCCTATGAAGAAGAACAAAATCGAATTAAAAAAGAGGCTTTAAAAGCCAGTCTTATGAAAGAGGAAGAATTGAAAACATCTCATGGGGCTGATAATGATATTAGTGATCCAATGGTCATTGATTCTGGCAATAATCATGTACCACCTGAAGTGACTGGTCCACGAGGCGGAGGTTACCGGGACATATTTATTGATGGATTTGTTCCCCCTTCGACGAGTGTTGCTCCAATATTTCCCTGTTATGAGAATACCTCAGAGTGGGATGATTTTGGTGAGGTCATAAATCCAGATGATTATGTAATTAAGGATGAAGACATGGACCAGACAGCAATGCATGGTGGAAGTGATATAAATGGAAAACTAGATGAAGGTGCTGCAAGTTTGATACTTGATACAAAGCCATCAAAAGTCGTATCTGATGAAAGGACTGTGCAAGTCAGGTGTTCATTGGTTTACATGGATTTTGAAGGACGTTCAGATGGAAGATCCATTAAAAATATTCTCTCTCATGTGGCTCCCTTGAAGCTGGTTTTGGTGCATGGATCAGCTGAAGCTACAGAGCATCTGAAACAGCACTGCCTGAAGCATGTCTGTCCACATGTTTATGCTCCCCAAATTGAAGAGACAATTGATGTTACCTCTGATTTATGTGCTTATAAGGTTCAACTGTCCGAGAAGCTCATGAGTAATGTACTCTTCAAAAAGCTGGGAGATTATGAAATAGCTTGGGTTGATGCTGTAGTAGGGAAGACAGAAAATGATCCGCTTTCGCTGCTCCCTGTTTCTGGAGCAGCTCCTCCGCATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATATCAAACAGTTTCTCTCCAGCAAGGGTGTTCAGGTGGAATTTGCTGGTGGGGCTTTGCGTTGTGGTGAATATGTAACTCTTCGGAAAGTTGGGGATGCAAGTCAGAAGGGTGGTGGTTCTGGTGCTCAGCAAATAGTTATTGAGGGTCCTCTGTGTGAAGATTACTATAAAATTCGTGATTATCTCTATTCACAGTTTTATTTGCTTTAG 2220 0.4239 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVGRVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDFGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1121 739 Pfam Cleavage and polyadenylation factor 2 C-terminal 650 736 IPR025069 -
Gso9g1121 739 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 1 738 IPR027075 GO:0005847|GO:0006378|GO:0006379
Gso9g1121 739 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 602 IPR036866 -
Gso9g1121 739 Pfam Metallo-beta-lactamase superfamily domain 22 188 IPR001279 -
Gso9g1121 739 Pfam Beta-Casp domain 242 365 IPR022712 -
Gso9g1121 739 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 533 584 IPR011108 -
Gso9g1121 739 Gene3D - 7 257 IPR036866 -
Gso9g1121 739 Coils Coil 392 412 - -
Gso9g1121 739 SMART Beta_Casp_2 242 365 IPR022712 -
Gso9g1121 739 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1121 Gso-Chr9 32200649 32220760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1121 K14402 - gmx:100777002 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1502 16 35252668 35264977 Gso9g1121 9 32200649 32220760 GST