Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1118 ATGACTTCTATCTCCCTTCTTCACGCCCTGTTCGTGTTCTTCTTCCTAATTGCCACTTCTCTTACGGAAAGTAGGAAGGAATTAAGGAGCAAGCAGGAAACTGCATTACAAATGTTAGAGCACTCAATTCATTATTCCAACAGAATTAATCCATCACGTGTTGTCCAAATCTCCTGGCAACCAAGGGTTTTTCTGTACAAAGGGTTTTTGTCGGACAAGGAGTGTGACTACCTTGTTTCTTTGGCATATGCTGTGAAAGAAAAATCCTCAGGGAATGGTGGCTTTTCAGAGGGGGTTGAAACTTTCTTGGATATCGAAGATGATATTCTTGCAAGAATTGAAGAAAGACTTTCACTTTGGGCTTTCCTTCCTAAAGAGTACAGCAAGCCTTTGCAGGTCATGCATTATGGGCCTGAGCCGAATGGTCGGAACTTAGATTATTTTACAAACAAAACCCAATTAGAATTAAGTGGACCTTTAATGGCAACAATTGTTCTATATCTCTCAAATGCTGCTACTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTTCCCAGGAGTAGCAGCTGGTCAAGTTGTAGTAATAGCAGCAACATTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCGAGTGCTTCTCCTGACAAGAATAGCTTCCATGCTAGATGCCCTGTCCTTGAGGGTAATATGTGGTCTGCAATTAAATACTTCTATGCAAAACCAATTAGTAGTGGCGAAGTCTCAGCCATTTCAGATGGTGGTGAATGCACTGATGAGGATGACAATTGTCCCGCTTGGGCAGCCATGGGAGAATGTCAAAGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAATGCATGCTGA 906 0.4183 MTSISLLHALFVFFFLIATSLTESRKELRSKQETALQMLEHSIHYSNRINPSRVVQISWQPRVFLYKGFLSDKECDYLVSLAYAVKEKSSGNGGFSEGVETFLDIEDDILARIEERLSLWAFLPKEYSKPLQVMHYGPEPNGRNLDYFTNKTQLELSGPLMATIVLYLSNAATQGGQILFPESVPRSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKNSFHARCPVLEGNMWSAIKYFYAKPISSGEVSAISDGGECTDEDDNCPAWAAMGECQRNPVFMIGSPDYYGTCRKSCNAC* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1118 301 Gene3D q2cbj1_9rhob like domain 45 243 - -
Gso9g1118 301 SMART p4hc 61 243 IPR006620 GO:0005506|GO:0016705|GO:0031418
Gso9g1118 301 Pfam 2OG-Fe(II) oxygenase superfamily 132 243 IPR044862 -
Gso9g1118 301 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 1 301 IPR045054 -
Gso9g1118 301 SMART ShkT_1 260 301 IPR003582 -
Gso9g1118 301 ProSiteProfiles ShKT domain profile. 261 301 IPR003582 -
Gso9g1118 301 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1118 Gso-Chr9 32175019 32179044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1118 K00472 - gmx:100775928 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1499 16 35229845 35233868 Gso9g1118 9 32175019 32179044 GST