Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1499 ATGGCTTCTATCTCCCTTCTTCTCGCCCTGTTCGTGTTCTTCCTAATTGCCACTTCTCTTACCGAAAGTAGGAAGGAATTAAGGAACAAGCAGGAAACTGCATTACAGATGTTAGAGCGCTCAATTCATTTTTCCAACAGAATTAATCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTATACAAAGGGTTTTTGTCGGACAAGGAGTGTGACTACCTTGTTTCTTTGGCATATGCTGTGAAAGAAAAATCCTCAGGGAATGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTTCCTAAAGAGTACAGCAAGCCTTTGCAGGTCATGCATTATGGGCCTGAGCAGAATGGTCGGAACTTAGATTATTTTACAAACAAAACCCAATTAGAATTAAGTGGACCTTTAATGGCAACAATTATTTTATATCTCTCAAATGATGTTACTCAAGGGGGTCAAATTCTTTTTCCTGAATCAGTGCCTGGGAGTAGCAGCTGGTCAAGTTGTAGTAATAGCAGCAATATTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGCTTCCATGCTAGATGCCCTGTCCTTGAGGGTGATATGTGGTCTGCAATTAAATACTTCTATGCAAAACCAATTAGTAGAGGTAAAGTCTCAGCCACATTAGATGGTGGTGAATGCACTGATGAAGATGACAGTTGTCCCGCTTGGGCAGCCGTGGGAGAATGTCAACGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAATGCATGCTGA 903 0.4164 MASISLLLALFVFFLIATSLTESRKELRNKQETALQMLERSIHFSNRINPSRVVQISWQPRVFLYKGFLSDKECDYLVSLAYAVKEKSSGNGGLSEGVETSLDMEDDILARIEERLSVWAFLPKEYSKPLQVMHYGPEQNGRNLDYFTNKTQLELSGPLMATIILYLSNDVTQGGQILFPESVPGSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKSSFHARCPVLEGDMWSAIKYFYAKPISRGKVSATLDGGECTDEDDSCPAWAAVGECQRNPVFMIGSPDYYGTCRKSCNAC* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1499 300 Pfam 2OG-Fe(II) oxygenase superfamily 130 242 IPR044862 -
Gso16g1499 300 SMART p4hc 60 242 IPR006620 GO:0005506|GO:0016705|GO:0031418
Gso16g1499 300 ProSiteProfiles ShKT domain profile. 260 300 IPR003582 -
Gso16g1499 300 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 4 300 IPR045054 -
Gso16g1499 300 SMART ShkT_1 259 300 IPR003582 -
Gso16g1499 300 Gene3D q2cbj1_9rhob like domain 52 242 - -
Gso16g1499 300 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 4 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1499 Gso-Chr16 35229845 35233868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1499 K00472 - gmx:100795761 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1499 16 35229845 35233868 Gso16g1499 16 35229845 35233868 ECH
Gso16g1499 16 35229845 35233868 Gso9g1118 9 32175019 32179044 GST