Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1066 ATGTGTTCGGCATTTGTGTTATTTGCTGCTATCACATCAGGTCTTTCTCTAGGACTCTTGTCCTTCAGCCAAGTTGATCTTGAGGTTCTTGTTAAAGCTGGGCAGCCTAAAATCCAGAAGAATGCAGCGAAAATTATGTCCATTGTCAAGAATGAGCATTTACTTTTATGCACCCTCCTCATAGCTAAATCAATGGCACTGGAGGGGGTTTCTGTTTTTTTGGAGAAAATGTTCCCAGAGTGGCTTTCTGTATTAATAGCAGCTACCATTTTGGGTTTGACCGCAGAGATTATCCCACAAGCCTTGTGTTCTCAATATGGTTTAAGTGTTGGGGCAGCAATGTCTCCCTTTGTTCGAGTTCTTATGATGGTTTTCTTCCCAATTGCATATCCACTTAGTAAGTTGTTGGATTGGCTTTTTGGCAAGGGGCATACTGCACTTCTAGGACGAGCAGAGCTGAAGACTTTAGTCCATTTACATGCTATTGAGGCAGGGAAAGGTGGAGAGTTGTCACTTCATGAAACTAGAATAATTGCTGGTGCTTTGGACTTGACACAGAAGACTGCTAAAGATGCTATGACTCCTATAAGTGAAACATTTTCTCTTGACATAAACTCCAAACTTGACATGCATACAATGGGCTTAATAATGAGCATAGGTCACAGCCGAATACCAGTCTACTCTGGAAAACAAACAAATATTGTTGGCATTATCTTGGTCAAGAATCTAATCTTCTGTCATCATGAAGATGAAATGCCAATTAAGTTTATGACTATCAGGAGAGTTCCTAGGGTTGGTGAAGATTGGCCACTATATGATATCCTGAATCAATTCAAGAAGGGTCAAAGCCACATGGCTGTTGTCCTCAAGTGTGGGGGTAACATCAGAACTGCTGCAACTGGTACAGAAGGACATTGCCCTTCATTTGAACCGGGAGATCATTTCCGCATATCAACTGATGCATCAAATTGGCATTCACAAGAAACAGAATATTATAGTGCAACACTGAAGAGTGTCATGCATCGAGAGGGTGACTCAGATCTTCTGCAAAGAAGATCAGAACAACCTGATGCAAGTTCATCCTTTGAGAATTTGGAGTCTCTTTCAACAGAAGACGAGGAAGTGATTGGGATAATCACATTGGAAGATGTTATGGAAGAGTTACTTCAGGAAGATATATTGGATGAAACTGATCAATATGTTGATGTCCATCAAAATATCAGAATCAAACTAGAACATGCAAGAAGAGTGTCATCAGGGTCCTCCAGAAGGGCTTCAAGTACTCGTCAACAACGGAGAAGTTCAGATGCATCTCGAGTTTTTACATATGTTTCATCTGTTTCTCCATAA 1350 0.4074 MCSAFVLFAAITSGLSLGLLSFSQVDLEVLVKAGQPKIQKNAAKIMSIVKNEHLLLCTLLIAKSMALEGVSVFLEKMFPEWLSVLIAATILGLTAEIIPQALCSQYGLSVGAAMSPFVRVLMMVFFPIAYPLSKLLDWLFGKGHTALLGRAELKTLVHLHAIEAGKGGELSLHETRIIAGALDLTQKTAKDAMTPISETFSLDINSKLDMHTMGLIMSIGHSRIPVYSGKQTNIVGIILVKNLIFCHHEDEMPIKFMTIRRVPRVGEDWPLYDILNQFKKGQSHMAVVLKCGGNIRTAATGTEGHCPSFEPGDHFRISTDASNWHSQETEYYSATLKSVMHREGDSDLLQRRSEQPDASSSFENLESLSTEDEEVIGIITLEDVMEELLQEDILDETDQYVDVHQNIRIKLEHARRVSSGSSRRASSTRQQRRSSDASRVFTYVSSVSP* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1066 449 ProSiteProfiles CNNM transmembrane domain profile. 1 174 IPR002550 -
Gso9g1066 449 MobiDBLite consensus disorder prediction 415 439 - -
Gso9g1066 449 CDD CBS_pair_CorC_HlyC_assoc 188 289 IPR044751 -
Gso9g1066 449 SUPERFAMILY CBS-domain pair 177 390 IPR046342 -
Gso9g1066 449 PANTHER CBS DOMAIN PROTEIN 1 443 - -
Gso9g1066 449 Gene3D - 318 396 IPR046342 -
Gso9g1066 449 Gene3D - 174 304 IPR046342 -
Gso9g1066 449 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 443 IPR045095 GO:0010960
Gso9g1066 449 Pfam Cyclin M transmembrane N-terminal domain 4 163 IPR002550 -
Gso9g1066 449 MobiDBLite consensus disorder prediction 343 368 - -
Gso9g1066 449 MobiDBLite consensus disorder prediction 420 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1066 Gso-Chr9 30796149 30800836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1066 K16302 - gmx:100790334 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1456 16 34797583 34802122 Gso9g1066 9 30796149 30800836 GST