Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1456 ATGAGTTCATATTTTGAGGAAAGGGCACCTTGTTGTGGAAGTCACTTTTGGATTTTACTAAGCATGTGTTGGGCATCTGTGTTATTTGCTGCTATCACATCAGGTCTTGCTCTAGGACTCTTGTCCTTCAGCCAGGTTGATCTTGAGGTTTTTGTTAAAGCTGGGCAGCCAAAAATCCAGAAGAATGCAGCGAAGATTATGTCCATTGCAAAGAATGAGCATTTACTTTTATGCACCCTCCTCATAGCTAAATCAATGGCACTGGAGGGGGTTTCTGTTTTTATGGAGAAAATGTTCCCAGAATGGCTTTCAGTATTATTAGCAGCCACCATTTTGGCTACCATTGCAGAGATTATCCCTCTAGCCTTGTGTTCTCGATATGGTTTAAGTGTTGGGGCAACATTGTCTCCCTTTGTTCGAGTTCTTATGATGGTTTTCTTCCCAATTGCATATCCACTTAGTAAGTTGTTGGATTGGATTTTTGGCAAGGGGCATACTGCTCTTTTAGGACGAGCAGAGCTGAAGACTTTAGTCCATTTACATGCTAATGAGGCAGGGAAAGGTGGAGAGTTGTCACTTCATGAAACTACAATAATTGCTGGAGCTTTGGACTTGACACAGAAGACTGCTAAAGATGCTATGACACCGATAAGTGAAACATTTTCTCTTGACATAAACTCCAAACTGGACATGCATACAATGGGCTTAATAATGAGCAAAGGTCACAGCCGAATACCAGTCTACTCTGGAAAACAGACAAATGTTGTTGGTATTATCTTGGTCAAGAATTTAATCTTCTGTCATCCTGAAGATGAAACACCAATTAAATATATGACTATCAGGAGAGTTCCCAGAGTTGGTGAAGATTGGCCACTATATGATATCTTGAATCAATTCAAGAATGGTCAAAGCCACATGGCTGTTGTCCTCAAGTGTGGAGAGAACATCAGAACTGTAGCAACTCATACCGAAAGCAAAACTCCAGGACATTGCTCTTCAGTTGAACTGGGAGATTATATTCGCATCTCAACCGATGCATCCAATTGGCATTCACAAGAAACAGAATATTATAGTGCAACACTGAAGAGCATCATGCATCGCGAGGGTGACTCAGATCTTCTGCAAAGAAGATCAGAACAACCTGATGCAAGTTCATCCTTTGAGAATTTGGAGTCTCTTCCAACAGCGGATGAGGAAGTGATTGGGATAATCACATTGGAAGATGTTATGGAAGAGTTACTTCAGGAAGATATATTGGATGAAACTGATCAATATGTTGATGTCCATCAAAATATCAGAATCAAACTGCAACATGCAAGAAGAGGGTCATCAGGGTCCTCCACAAGGGTTTCAAGCTCTCGTCAAAAACGGAGAAGTTCAGATGCATCTCGAGTTTGCTTTTTAACTCCTACATATGTTTCACCCGTTTCTCCTTAA 1437 0.4092 MSSYFEERAPCCGSHFWILLSMCWASVLFAAITSGLALGLLSFSQVDLEVFVKAGQPKIQKNAAKIMSIAKNEHLLLCTLLIAKSMALEGVSVFMEKMFPEWLSVLLAATILATIAEIIPLALCSRYGLSVGATLSPFVRVLMMVFFPIAYPLSKLLDWIFGKGHTALLGRAELKTLVHLHANEAGKGGELSLHETTIIAGALDLTQKTAKDAMTPISETFSLDINSKLDMHTMGLIMSKGHSRIPVYSGKQTNVVGIILVKNLIFCHPEDETPIKYMTIRRVPRVGEDWPLYDILNQFKNGQSHMAVVLKCGENIRTVATHTESKTPGHCSSVELGDYIRISTDASNWHSQETEYYSATLKSIMHREGDSDLLQRRSEQPDASSSFENLESLPTADEEVIGIITLEDVMEELLQEDILDETDQYVDVHQNIRIKLQHARRGSSGSSTRVSSSRQKRRSSDASRVCFLTPTYVSPVSP* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1456 478 MobiDBLite consensus disorder prediction 437 462 - -
Gso16g1456 478 Gene3D - 195 330 IPR046342 -
Gso16g1456 478 PANTHER CBS DOMAIN PROTEIN 6 478 - -
Gso16g1456 478 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Gso16g1456 478 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 478 IPR045095 GO:0010960
Gso16g1456 478 MobiDBLite consensus disorder prediction 372 391 - -
Gso16g1456 478 SUPERFAMILY CBS-domain pair 198 415 IPR046342 -
Gso16g1456 478 Pfam Cyclin M transmembrane N-terminal domain 26 184 IPR002550 -
Gso16g1456 478 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1456 Gso-Chr16 34797583 34802122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1456 K16302 - gmx:100798424 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1456 16 34797583 34802122 Gso16g1456 16 34797583 34802122 ECH
Gso16g1456 16 34797583 34802122 Gso9g1066 9 30796149 30800836 GST