Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1052 ATGAAGGGCACCATAGTTCTACACCCTGCCATGGGTAGGGGACACCTAGTCCCCATGGTAGAACTTGGCAAGTTCATATACACTCACCACCACCAAAACCTCCCCATCAAAATCCTCCTCCCTTCGCCGCCCAACTCCACCACCCTTCAATACATCGCCGCCGTCTCCGCCACCACGCCTTCGATCACCTTCCACCACCTCTCACCCTCACAACACTTACTCCACGTCCTCCAAACCCTCATCTCCCAATCTTCCAAACCCAAAGCCTTCATCCTAGACTTCTTCAACCACTCCGCTGCTGATGTCACACGAACCCTAAAAATCCCCACCTACTATTACTTCCCCAACTCCGCGAGTTGCGTCGCTCTCTTCCTTTACACCCCAACCATCCACTACAACACCAAGAAAGGCTTTTCCAGTTACAGCGACACGCTTCGCCGCATCCCCGGTTTGCCGCCACTGTCGCCGGAGGACATGCCCACCTCCCTCCTCGACCGCCGGAGCTTCGAGTCCTTCGCCAACATGTCGATTCAAATGAGAAAAACAGATGGAATAATCGTTAACACGTTCGAGAAGCTTGAGAATAAAGCTTTCTTCGCGTTGAAGAATGGGATCTGCATGTCATTAGAAACACATAAGTCTCATTCTTCAACGCCAGAAACACGTAACCCACGTGTCTTTTGCATGGGCCCACTTGTTTCTAACGGTGGAGGTGAACATGATAATGATGATAGTGGTTGCATGAGTTGGCTCGACTCGCAACCGAGTCGAACCGTTGTGTTTTTAAGCTTTGGAAGCTACGGAAGGTTCTCGAAGAGTCAGATAAGGGAGATAGCGTTAGGGTTAGAGAGGAGTGGACAAAGGTTTTTGTGGGTTATGAGGAACCCATATGAGAGAAGTGAATTGATTTTGGAGGAATTGTTGCCAAAAGGGTTTTTGGAAAGAACTAAAGAGAGGGGAATGGTGATGAAGAATTGGGCGCCACAAGTTAAGATTCTGAGTCATGACTCGGTGGGTGGGTTCGTGACTCACTGCGGGTGGAACTCGGTGTTGGAAGCGGTCTCTTGGGGTGTGCCTATGGTGTCGTGGCCTTTGTATGCGGAACAAAGGTTGAATAGGGTGGTTATGGTTGAGGAGATGAAGGTGGCTTTGGCGTTGAAGGAGAACGAAGATGGGTTTGTTAGGGCTAGTGAGTTGGAAGAGCGAGTTAGGGAGCTTATGGACTCGGAGAGAGGGAGAGGGAAAGAGGTTAGAGAGAGAGTTTTGAGCGCGAGATATGATGCTGTAGCTGCACTCAGCGATGGTGGATCTTCACGGGTTGAGTTGAATGACTTGGTTGAGTTGTGGATGCAATGA 1356 0.5007 MKGTIVLHPAMGRGHLVPMVELGKFIYTHHHQNLPIKILLPSPPNSTTLQYIAAVSATTPSITFHHLSPSQHLLHVLQTLISQSSKPKAFILDFFNHSAADVTRTLKIPTYYYFPNSASCVALFLYTPTIHYNTKKGFSSYSDTLRRIPGLPPLSPEDMPTSLLDRRSFESFANMSIQMRKTDGIIVNTFEKLENKAFFALKNGICMSLETHKSHSSTPETRNPRVFCMGPLVSNGGGEHDNDDSGCMSWLDSQPSRTVVFLSFGSYGRFSKSQIREIALGLERSGQRFLWVMRNPYERSELILEELLPKGFLERTKERGMVMKNWAPQVKILSHDSVGGFVTHCGWNSVLEAVSWGVPMVSWPLYAEQRLNRVVMVEEMKVALALKENEDGFVRASELEERVRELMDSERGRGKEVRERVLSARYDAVAALSDGGSSRVELNDLVELWMQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1052 451 Gene3D Glycogen Phosphorylase B; 5 439 - -
Gso9g1052 451 CDD GT1_Gtf-like 5 434 IPR002213 GO:0008194
Gso9g1052 451 PANTHER ISOFLAVONE 7-O-GLUCOSYLTRANSFERASE 1 1 68 - -
Gso9g1052 451 PANTHER ISOFLAVONE 7-O-GLUCOSYLTRANSFERASE 1 70 451 - -
Gso9g1052 451 Gene3D Glycogen Phosphorylase B; 244 433 - -
Gso9g1052 451 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 450 - -
Gso9g1052 451 PANTHER GLYCOSYLTRANSFERASE 70 451 - -
Gso9g1052 451 PANTHER GLYCOSYLTRANSFERASE 1 68 - -
Gso9g1052 451 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 243 380 IPR002213 GO:0008194
Gso9g1052 451 ProSitePatterns UDP-glycosyltransferases signature. 326 369 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1052 Gso-Chr9 30340511 30342256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1052 5 449 Glycosyltransferase AT3G16520 44.654 5.04e-127 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1052 - K12938 gmx:100807122 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1052 9 30340511 30342256 Gso9g1052 9 30340511 30342256 ECH
Gso16g1445 16 34654717 34656362 Gso9g1052 9 30340511 30342256 GST