Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1445 ATGAAAGACACCATTGTTCTATACCCTAATCTTGGTAGGGGACACCTAGTTTCCATGGTGGAGTTGGGAAAACTCATACTGACCCACCACCCTTCACTTTCCATCACTATTCTCATCCTCACTCCTCCCACCACCCCTTCCACCACCACCACCTTAGCCTGCAACTCTAATGCTCAATACATCGCCACCGTCACCGCCACCACTCCCTCCATCACGTTCCACCGCGTTCCCCTCGCCGCACTCCCCTTCAACACCCCCTTCCTCCCCCCTCACCTCCTCTCCCTCGAACTCACCCGCCACAGCACGCAAAACATCGCCGTTGCACTCCAAACCCTCGCCAAAGCTTCGAACCTCAAAGCCATCGTCATGGACTTCATGAACTTCAACGACCCCAAAGCCCTCACTGAAAATCTCAACAACAACGTCCCCACTTACTTCTACTACACTTCCGGCGCCTCCCCTCTCGCTTTACTCCTTTACTACCCCCCCATTAACCAAGTCCTTATAGAAAAAAAGGACAAAGACCAACCTTTGCAAATCCAAATCCCTGGATTACCCACAATTACAGCCGATGATTTTCCAAACGAATGCAAAGACCCTTTGAGTTACGTTTGCCAAGTCTTCCTTCAGATAGCGGAAACCATGATGGGTGGTGCCGGGATTATAGTAAACACATTTGAAGCCATTGAAGAAGAAGCCATCAGAGCGTTAAGTGAGGATGCGACAGTACCACCACCCTTGTTTTGTGTCGGACCCGTGATTTCTGCACCGTATGGAGAAGAAGACAAAGGGTGTCTGAGTTGGCTAAACTTGCAACCGAGTCAGAGCGTCGTGTTGCTGTGTTTCGGAAGCATGGGAAGGTTCTCGAGGGCTCAGTTGAAGGAGATAGCTATTGGGTTGGAGAAGAGTGAGCAAAGGTTCTTGTGGGTTGTGAGAACCGAGTTGGGTGGTGCTGATGACTCGGCGGAGGAACTGAGTCTGGACGAGTTGTTGCCAGAAGGGTTTTTGGAGAGGACCAAGGAGAAGGGAATGGTGGTGAGGGACTGGGCCCCACAGGCGGCGATTCTGAGTCACGACTCGGTGGGTGGGTTCGTGACTCACTGCGGTTGGAACTCGGTGTTGGAAGCGGTGTGTGAAGGGGTGCCGATGGTGGCGTGGCCTCTCTACGCGGAGCAGAAGATGAACAGGATGGTTATGGTGAAGGAAATGAAGGTGGCTTTGGCGGTGAAAGAGAACAAGGATGGGTTCGTGAGTTCGACTGAGTTGGGGGACCGAGTTAGGGAACTCATGGAATCAGACAAAGGGAAAGAGATTCGTCAGAGGATTTTCAAGATGAAAATGAGTGCTGCGGAAGCAATGGCTGAAGGCGGAACATCACGTGCTTCGTTGGATAAGTTGGCTAAGCTGTGGAAACAGAGTTGA 1422 0.5169 MKDTIVLYPNLGRGHLVSMVELGKLILTHHPSLSITILILTPPTTPSTTTTLACNSNAQYIATVTATTPSITFHRVPLAALPFNTPFLPPHLLSLELTRHSTQNIAVALQTLAKASNLKAIVMDFMNFNDPKALTENLNNNVPTYFYYTSGASPLALLLYYPPINQVLIEKKDKDQPLQIQIPGLPTITADDFPNECKDPLSYVCQVFLQIAETMMGGAGIIVNTFEAIEEEAIRALSEDATVPPPLFCVGPVISAPYGEEDKGCLSWLNLQPSQSVVLLCFGSMGRFSRAQLKEIAIGLEKSEQRFLWVVRTELGGADDSAEELSLDELLPEGFLERTKEKGMVVRDWAPQAAILSHDSVGGFVTHCGWNSVLEAVCEGVPMVAWPLYAEQKMNRMVMVKEMKVALAVKENKDGFVSSTELGDRVRELMESDKGKEIRQRIFKMKMSAAEAMAEGGTSRASLDKLAKLWKQS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1445 473 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Gso16g1445 473 Gene3D Glycogen Phosphorylase B; 262 454 - -
Gso16g1445 473 PANTHER ISOFLAVONE 7-O-GLUCOSYLTRANSFERASE 1 1 472 - -
Gso16g1445 473 CDD GT1_Gtf-like 5 461 IPR002213 GO:0008194
Gso16g1445 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 437 IPR002213 GO:0008194
Gso16g1445 473 Gene3D Glycogen Phosphorylase B; 5 460 - -
Gso16g1445 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 470 - -
Gso16g1445 473 PANTHER GLYCOSYLTRANSFERASE 1 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1445 Gso-Chr16 34654717 34656362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1445 2 470 Glycosyltransferase AT3G16520 44.235 1.49e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1445 - K13263 gmx:100777343 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1445 16 34654717 34656362 Gso9g1052 9 30340511 30342256 GST