Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0809 ATGATAAACGATAAAGAAGTGTACAATGTTATGGCAGCTCTTGTGCCCCTATATGTGCCAATGATATTGGCCTATTACTCCGTGCGGTGGTGGAAGATATTCACTCCGGAACAGTGCTCCGGCATAAACCGCTTCGTGGCAATATTTGCAATTCCTTTCCTTACATTCCATTTCCTATCCTCCAACAGCCCTTACACTATGAACATTTTGTTCATAGCCGCAGACACTCTTCAAAAAGTTGTGATTTTGGGTGCCCTATTTCTATGGACTGCCTTCGCAAAGCGTGGTGGCGGTCTCGACTGGACCATCACACTCTTCTCTCTTTCCACCCTACCAAACACACTCATCGTCGGTGTCCCGCTTCTGACAGCTATGTATGGAGACTCATCAGCCAGTCTCATGAGCCAACTTGTGTTCATGCAAGGTGTCTTGTGGTTTACCCTAATGTTGTTCTTGTACGAATATCAAGGCGCTATGCACCTCTTTTTGAATCGGATACCTGATAGTGGAGATTCCATCATCACCACATTCACCGTTGATCCTGATGTTAACACTCTCAATGGCAACGAGCCGCTACTAGTTGACCTAGAAAAGAAAGAAAATGGAGAACTTCATGTCATGGTAAGAAGTTCTTCATTAAAAATCTTTAACCGTTCAACCGAGATGTGTTGTGCCCATTTACCAAAGCGAAGAGCTTCAAGTTTTAGTACAATTCTTGATCTCCAAAGTGAGGGTTTTGAAGAGATGCCGAAGATCCATGAGGAGAAAATGTGCAAGAGGGACGCTTTTAAGTATCTTTTGAATTCAGTGAAACATGAATCAATCATTGACACGAGTTCGAGTCCCAAAGTAATAGAGGACAAGGAGGTCAAGATTGTGCATGGGATCCAATATCCCTTAAGCAAGGGCCCAAAAGAGGTAAAAATTGAAGAAAAAGATGCATATAAAAAACAACAAATGCCACGTGCTAGTGTCATGGTAAGGCTCACTCTCTCCATGGTTTGGCGGAATCTCGTGAGAAACCCTAATACATACGCGAGTTTTTTTGGATTAGTATGGTCTCTCATATCATTTAGGTGGAACATCAAAATGCCATCCATTATAAATGGTTCCATTTTAATACTATCACAAACTGCAACGGGAATAGCCATGTTTAGTATGGGTCTATTCATGGCATTACAACCCAAGATCATAGCTTGTGGAAAAACTTCGGCAGCAATGTCTATCGTAGCTCGATGTTTGGTTGGTCCTGCAGTAATTGGTGTAACCTCTATAGTCATCGGTATTCGAGGAGTTCTTCTACGTGTTGCAATTGTTCAGGCTGCTATACCTCAATCTATTGTTGCCTTTGTATTTGCCAAAGAATACAATATCCACGCAGATATACTTAGCACCGCGGTTATCTTCGGAACGGCGATTTCATTGCCCGCAACAATAATGTACTTTGTGCTTCTTGGACTCTAA 1464 0.4235 MINDKEVYNVMAALVPLYVPMILAYYSVRWWKIFTPEQCSGINRFVAIFAIPFLTFHFLSSNSPYTMNILFIAADTLQKVVILGALFLWTAFAKRGGGLDWTITLFSLSTLPNTLIVGVPLLTAMYGDSSASLMSQLVFMQGVLWFTLMLFLYEYQGAMHLFLNRIPDSGDSIITTFTVDPDVNTLNGNEPLLVDLEKKENGELHVMVRSSSLKIFNRSTEMCCAHLPKRRASSFSTILDLQSEGFEEMPKIHEEKMCKRDAFKYLLNSVKHESIIDTSSSPKVIEDKEVKIVHGIQYPLSKGPKEVKIEEKDAYKKQQMPRASVMVRLTLSMVWRNLVRNPNTYASFFGLVWSLISFRWNIKMPSIINGSILILSQTATGIAMFSMGLFMALQPKIIACGKTSAAMSIVARCLVGPAVIGVTSIVIGIRGVLLRVAIVQAAIPQSIVAFVFAKEYNIHADILSTAVIFGTAISLPATIMYFVLLGL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0809 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 273 487 IPR033526 GO:0010315|GO:0010329
Gso9g0809 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 223 IPR033526 GO:0010315|GO:0010329
Gso9g0809 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 273 487 - -
Gso9g0809 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 223 - -
Gso9g0809 487 TIGRFAM 2a69: auxin efflux carrier 1 487 IPR014024 -
Gso9g0809 487 Pfam Membrane transport protein 10 481 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0809 Gso-Chr9 14844695 14850149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0809 1 465 Organic Solute Cotransporters AT1G77110 40.325 4.68e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0809 K13947 - gmx:100800564 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1698 15 27789077 27793288 Gso9g0809 9 14844695 14850149 GST