Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1698 ATGATCGACGGTGTAGCAATATACAATATTGTGGCGGCTCTTGTGCCGCTATATGTGCCCATGATATTAGCCTATGCCTCAGTCTTGTGGTGGAAGATCTTCACACCGGAACAGTGTTCCGGCATAAACCGCTTAGTGGCACTGTACTCGGTTCCCTTTCTTAATTTCAATTTCCTAGCCTTTAACAATCCTTATGCTATGAACCTCAGGTTCATAGCTGCAGACACTCTTCAAAAAGTCATCATTTTGGGCGCTCTTTTTCTATGGAGTGCTTTCACAAAGTGTGGTAACCTCGATTGGACCATCACGCTTTTTTCTCTTTCCACTCTACCAAACACACTCATCGTGGGCGTCCCTCTTCTGACGGCCATGTATGGAGACTCATCAGGTAGCCTGATGAGTCAAATCTTTGTCATGCAGGGCGTCGTGTGGTTCACTCTAATGTTGTTCTTGTACGAATACAGAGGCGCCAAGAGCCTAATTTCGAACCAATTCCCCGAGAATGGAGGCTCCATCGCCTCGTTTACTGTGGATTCTGATGTTAACTCTCTCAACGGTAACGAGCCGCTGCAGGCCGACGTGGAAATGAAGGAAAATGGAGAACTTCATGTGGTGGTGAGGAGCCATTCATTCAACAATGACTCTCCTTGTAACTGTTCAACGTCAAACCATTGTAGCGAGGCAGAGATCTGTTCCATGCAACGATCTTTGAGTTTTAATACAACACGTGATCTCAAAAGAGAGGGTTCTAAAGAGGAGATGTCGAAGATCGACCAGGAAAAAATGTCCAGGAAGGACGCTTGTAATCACCTTTCTAATGGAGTGAAACATGAATCGATTGACATGAGTCCTAATCTTAAAGCAATGGGAGACAAAGAGGTTGGGATTGTGAATGTGGTCCAATATCCTTTAAGTGAGGGCCTAAAAGAGGAGAAAATTGAAGAAGGAGATGCATACAAAAAGCAGCAGCAAATGCCACGTGGTAGTGTCATGACAAGGCTTGTTCTAACCATGGTTTGGAGGAATCTCATTAGAAATCCTAATACCTACGCATGTGTTTTAGGACTCGCATGGTCTCTCATATCATTTAGGTGGAACATCAAAATGCCATCAATTGCGAAAGGTTCCATTTTAATACTGTCAAAAACCGGGACCGGAATGGCCATGTTCAGTTTGGGTCTATTCATGGCATTACAACCCAAGACCATTGCTTGTGGAAAAACTTGGACAACAATTTCTATGGTGGCTCGGTTCGTGGTTGGACCAGCCGTGATCGCTGTAACCTCCATAGTCATCGGCATCCGAGGAGTTCTTTTGCGTGTTGCAATTGTTCAAGCTGCTCTTCCTCAAGCTGTCCTCTCCTTTGTATTTGCTAAAGAATACAATCTCCACGCAGATATAATAAGCACAGCAGTCATATTTGGAACGGTGATTTCGCTGCCCATAACAATAATTTACTTCGTGCTTCTTGGACTCTAA 1479 0.4435 MIDGVAIYNIVAALVPLYVPMILAYASVLWWKIFTPEQCSGINRLVALYSVPFLNFNFLAFNNPYAMNLRFIAADTLQKVIILGALFLWSAFTKCGNLDWTITLFSLSTLPNTLIVGVPLLTAMYGDSSGSLMSQIFVMQGVVWFTLMLFLYEYRGAKSLISNQFPENGGSIASFTVDSDVNSLNGNEPLQADVEMKENGELHVVVRSHSFNNDSPCNCSTSNHCSEAEICSMQRSLSFNTTRDLKREGSKEEMSKIDQEKMSRKDACNHLSNGVKHESIDMSPNLKAMGDKEVGIVNVVQYPLSEGLKEEKIEEGDAYKKQQQMPRGSVMTRLVLTMVWRNLIRNPNTYACVLGLAWSLISFRWNIKMPSIAKGSILILSKTGTGMAMFSLGLFMALQPKTIACGKTWTTISMVARFVVGPAVIAVTSIVIGIRGVLLRVAIVQAALPQAVLSFVFAKEYNLHADIISTAVIFGTVISLPITIIYFVLLGL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1698 492 TIGRFAM 2a69: auxin efflux carrier 1 492 IPR014024 -
Gso15g1698 492 Pfam Membrane transport protein 10 486 IPR004776 GO:0016021|GO:0055085
Gso15g1698 492 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 237 492 - -
Gso15g1698 492 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 237 - -
Gso15g1698 492 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 237 492 IPR033526 GO:0010315|GO:0010329
Gso15g1698 492 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 237 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1698 Gso-Chr15 27789077 27793288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1698 321 483 Organic Solute Cotransporters AT1G73590 63.804 1.46e-62 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1698 K13947 - gmx:100781239 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1698 15 27789077 27793288 Gso9g0809 9 14844695 14850149 GST