Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0768 ATGGCGAGATTGAAGATAGGAGGGACATGGGCAGGGGTGCTGGAAGAGGTGGACCTCCAGGCGTGGACCCTGGCTACGCTCCGCGACCTCGTCGCCGCCCGATCGAACTCCCCCTCCTCCGACTCCATCAACCTCATCTGCGCCGGCAAGATTCTCAAAGACGACGCCGTTCCGCCCCAAACTCTTGCCCAACTCGGCGTCAAGAACAATGCGAAGATCCTCGCCACGCGCACCTCCACTCCTCAGCAAGGACACTCCTTCCTCGCCCAGGAAGAACGCTCCTCCAGACTCGCGCGTATAAGGGCGGCTGCGAATGCGATGGCGGACAGGCATGCGGATGGGGCATTGCCAGTTGAAGACTTCAATATTGAAGTTGAGGATCAGAGTGGACAGAAAGTGAGATTAGGCTCTGAGACTGATCAGAGGGCAGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGCGACTTATCAGACAGGGGAATTACAAAGATGCACTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATCCAAAAGTCATTGAGCTCATTGACAATGTTCCAATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGAGACATCAGATGGCTCTCAGATGCAGGAAAGCGTCTTGAAATGGCTCGGGAAGGTATTGAACGTGCTCATGGAAAGGATTCTTTTCGCCTCAGACTCTTACAAGTAGGTCGATATCCAGAACTCGCATTGCATTTGAGACTAGAGCTACTTGAAGGGGTAGTGGCATATCATATTGGCCAATTGGAGAAATCCAAAAAAACATTAGCCTCAGCAAGGACAAAGTTTATCCAGCTGCAAGTGCCAGATGAAGCCTTATCACTTGTTATGAGCATGGGCTTTGTTGAACGCGATGCAAAGCGAGCATTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGGCAAAGAAATTGCAAAAGAGGGAGGAAGATATTCGGAGGAGAAATGAAATTAAGGAACAAAAGCAGTATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGATTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGACACTCAGAAAGCATTGGATGATTTGACGAATCCAGAAACTAATTCTGCTTTGCAGGTCAATATCGAGTCAAGGAAAAGGAAGAGACAGAAACAAGCACGAGATTCTGAAATTAGAAACGTTGTGCAAATGGGTTTCGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGAGGTAGTTTAGAAGAAGTATTGCAAAGACTAACAGCACAACCTGGGACTGACCCCACACAACCTCAAGAAAATTCAGCTTCTGCTTCCCATGGTGGTGCAAGTTCATCTGCTCCTTTGCCAGACAATGTTGATTCTGATATAGCGATGAACGAGGTTGAAGATCCCAGTATAACAGAACAACGCGATGTAGAGATGGAAGATGAGCTCTCTGCAGATATAGCGAAAGCAGATGCCTTGGCTGATTATGACATCGAAGTTAACGTCGAAGGGGAAGCCATAACCGAGTACCTTTCCCTGGTTGAGTCGGCAGGCAGTTGTGGGAAAACTGCTCCTTCCCAGTAA 1671 0.4788 MARLKIGGTWAGVLEEVDLQAWTLATLRDLVAARSNSPSSDSINLICAGKILKDDAVPPQTLAQLGVKNNAKILATRTSTPQQGHSFLAQEERSSRLARIRAAANAMADRHADGALPVEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMAREGIERAHGKDSFRLRLLQVGRYPELALHLRLELLEGVVAYHIGQLEKSKKTLASARTKFIQLQVPDEALSLVMSMGFVERDAKRALRMNNQDVGGAIDFLAEEKAKKLQKREEDIRRRNEIKEQKQYGMTPLKKAVDLERLKELVSIGFDKELAAEALRRNENDTQKALDDLTNPETNSALQVNIESRKRKRQKQARDSEIRNVVQMGFERSRVVAAFEAGGSLEEVLQRLTAQPGTDPTQPQENSASASHGGASSSAPLPDNVDSDIAMNEVEDPSITEQRDVEMEDELSADIAKADALADYDIEVNVEGEAITEYLSLVESAGSCGKTAPSQ* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0768 556 MobiDBLite consensus disorder prediction 455 484 - -
Gso9g0768 556 Coils Coil 327 347 - -
Gso9g0768 556 MobiDBLite consensus disorder prediction 407 421 - -
Gso9g0768 556 MobiDBLite consensus disorder prediction 498 512 - -
Gso9g0768 556 SUPERFAMILY UBA-like 279 325 IPR009060 GO:0005515
Gso9g0768 556 ProSiteProfiles Ubiquitin domain profile. 23 73 IPR000626 GO:0005515
Gso9g0768 556 Gene3D - 15 85 - -
Gso9g0768 556 MobiDBLite consensus disorder prediction 455 512 - -
Gso9g0768 556 CDD UBA 363 392 - -
Gso9g0768 556 Gene3D - 287 326 - -
Gso9g0768 556 Gene3D - 360 397 - -
Gso9g0768 556 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 285 325 IPR015940 -
Gso9g0768 556 MobiDBLite consensus disorder prediction 389 421 - -
Gso9g0768 556 SUPERFAMILY UBA-like 355 397 IPR009060 GO:0005515
Gso9g0768 556 SMART uba_6 287 324 IPR015940 -
Gso9g0768 556 SMART uba_6 359 396 IPR015940 -
Gso9g0768 556 SMART uba_6 419 455 IPR015940 -
Gso9g0768 556 MobiDBLite consensus disorder prediction 392 406 - -
Gso9g0768 556 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 357 397 IPR015940 -
Gso9g0768 556 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 546 IPR039749 -
Gso9g0768 556 SUPERFAMILY Ubiquitin-like 22 79 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0768 Gso-Chr9 12250158 12257081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0768 - - gmx:100792972 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1632 15 23904373 23909463 Gso9g0768 9 12250158 12257081 GST