Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1632 ATGGCGAAATTGAAGATAGGAGGGACATGGGCGGGGGTTCTGGAAGAGGTGGACCTCCAAGCCTGGACCCTCGCCACGCTCCGCGACCACGTCGCCGCCCGATCGAACACTCCCTCCGACTCCATCAACCTCATCTGCGCCGGCAAGATTCTCAAAGACGACACCGTTCCGCCCCAAACCCTCGCCCAACTCGGCGTCAAAAGCAACGCCAAGATCCTCGCCACTCGCGCCTCCACTCCTCAACAAGGACACTCCTTCCTCGCCCAGGAAGAACGCTCCTCCAGACTCGCGCGTATCAGGGCGGCTGCGAATGCAATGGCAGAAAGGCATGCGGATGGTGCGTTGCCGGTTGAAGACTTCAATATTGAAGTTGAGGATCAGAATGGACAGAAAGTGCGTTTAGGCTCTGAGACTGATCAGAGGGCAGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGCGACTTATCAGACAGGGGAATTACAAAGATGCCCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATCCAAAAGTCATTGAGCTCATTGACAATGTTCCGATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGAGACATCAAATGGCTCTCGGATGCAGGGAAGCGTCTTGAAATGGCCAGGGAAGGTATTGAACGTGCTCATGGAAAGGATTCTTTTCGCCTCAGGCTCTTGCAAGGAGGTCGCTATCCAGAACTTGCATTACATTTGAGACTAGAGCTACTTGAAGGGGTGGTGGCGTATCATACTGGCCAATTTGAGAAATCCAAACAAACATTAGCCTCAGCAAGGACAAAGTTTATCCAGCTGCAAGTGCCGGATGAAGCCTTATCACTTGTTATGAGCATGGGTTTTGCTGAACGTGATGCAAAGAGAGCATTGAGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGACAAAGAAACTGCGAAAGAGGGAGGAGGATATTCGGAGGAGAAATGAAATTAAGGAACAAAAGCGATATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGACACTCAGAAAGCATTGGATGATTTGACAAATCCAGAAACTAATTCTGCTTTACAGGTCAATATCGAGTCCAGGAAAAGGAAGAGACAGAAAGCAGCACGAGATTCTGAAATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGAGGTAGTTTAGATGAAGTATTGCAAAGACTGACAGCACAACCTGGGACTGACCCCACGCAACCTCGAGAAAATTCAGCTTCTGCTTCCCATGGTGGTGCAAGTTCATCTGCTCCTTTGCCAGACAATGTTGATGCTGATTTAGCGATGTATAAGGTTGAAGATCACAGTAAAACAGAACAACGAGATGTAGAGATGGAAGATGAGCTCTCTGCAGATATAGCGAAAGCAGATGCCTTGGCTGATTATGACATCGAAGTTACTGTAGAAGGGGAAGCCATAACTGAGTACCTTGCCCTGGTTGAGTCTGCAAGCTGTCGTGGGGAAACTGTTCCTTCCCAGTAA 1668 0.4802 MAKLKIGGTWAGVLEEVDLQAWTLATLRDHVAARSNTPSDSINLICAGKILKDDTVPPQTLAQLGVKSNAKILATRASTPQQGHSFLAQEERSSRLARIRAAANAMAERHADGALPVEDFNIEVEDQNGQKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIKWLSDAGKRLEMAREGIERAHGKDSFRLRLLQGGRYPELALHLRLELLEGVVAYHTGQFEKSKQTLASARTKFIQLQVPDEALSLVMSMGFAERDAKRALRMNNQDVGGAIDFLAEEKTKKLRKREEDIRRRNEIKEQKRYGMTPLKKAVDLERLKELVSIGFDKELAAEALRRNENDTQKALDDLTNPETNSALQVNIESRKRKRQKAARDSEIEKVVQMGFERSRVVAAFEAGGSLDEVLQRLTAQPGTDPTQPRENSASASHGGASSSAPLPDNVDADLAMYKVEDHSKTEQRDVEMEDELSADIAKADALADYDIEVTVEGEAITEYLALVESASCRGETVPSQ* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1632 555 MobiDBLite consensus disorder prediction 455 511 - -
Gso15g1632 555 Gene3D - 15 82 - -
Gso15g1632 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Gso15g1632 555 MobiDBLite consensus disorder prediction 391 405 - -
Gso15g1632 555 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 545 IPR039749 -
Gso15g1632 555 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
Gso15g1632 555 Gene3D - 359 396 - -
Gso15g1632 555 Gene3D - 286 325 - -
Gso15g1632 555 SUPERFAMILY UBA-like 259 324 IPR009060 GO:0005515
Gso15g1632 555 CDD UBA 362 391 - -
Gso15g1632 555 MobiDBLite consensus disorder prediction 406 421 - -
Gso15g1632 555 MobiDBLite consensus disorder prediction 455 478 - -
Gso15g1632 555 SUPERFAMILY UBA-like 354 396 IPR009060 GO:0005515
Gso15g1632 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Gso15g1632 555 MobiDBLite consensus disorder prediction 388 421 - -
Gso15g1632 555 MobiDBLite consensus disorder prediction 489 511 - -
Gso15g1632 555 SUPERFAMILY Ubiquitin-like 22 76 IPR029071 -
Gso15g1632 555 SMART uba_6 358 395 IPR015940 -
Gso15g1632 555 SMART uba_6 418 454 IPR015940 -
Gso15g1632 555 SMART uba_6 286 323 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1632 Gso-Chr15 23904373 23909463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1632 - - gmx:100804062 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1632 15 23904373 23909463 Gso9g0768 9 12250158 12257081 GST