LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g0705	ATGGAGGATGAAGCGGAAGAAACGAAGAGCGCGGCAAGAATATTCGTCGGAGGATTGGCAGAAGCCGTGAGCGCCGAGGACCTTCGAAGCTTATTCGCCTCTCTGGGCTCCGTCCAATCCGTCCAAACCATCCGAACCAAAGGCCGCAGCTTCGCCTACCTCGACTTCCTCTCCGACCCCAAATCCCTCTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAGGCTGAGGCTGGAGAAGGCCAAAGAAGACTATCTTGTGCGTTTGAAGAGAGAATGGGAACAAGGCACTCTAGATGATGCTACTCAAAAACCACCCACTGCTGCTTCTGAGGAGGAAATGCCCAACACCGCACAATCTTCCAAGTCAAATACCAAACACCTCAATATTTTCTTTCCCAGATTGAGAAAGGTGAAATCCATACCTTTCAGTGGAACTGGAAAGCACAAATACAGTTTTCAGAATATTAAAGTTCCTCCTCTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAAGCCTTTTGTCCCTGAAAGAGAAAAGCTATCTATTGATAGGACAGCTGAAAGTGGTGGAATAAATGATGAGGAGATTAGCATAATGAATGCTGTGATGAACAAGCTATTTGAAAAAGAACAGGTTTCCAATGCCAAGAACCTTGGAGAGGAGAAGGATTCTTTTGAATCACCTGATGCTTTACATTCTGATGAATGCGAAGATAGTGCAACAGATGAAGATGATCTCATTATTAACGTGGAGACAAAGAAAAATAAAACATCTTTAACAGAGGACAAGGAACTTCAAAGGATCTTGGAAAACCAGGAATCATGGTTTAATAAAAGAAAAATTGCTAAGGAAGAACCCAACAAGAGCACGCTTCTAGTGCAAAAAAGGAGTAATAGCAATCCTGACAAGAACAAGAAGAGAAAATCACTTCCCAAATTGGAAGTGTCTACTACCCCTGGAAGCAAGAGTAATATGCAGACCCTTCCAGATGAGGTGGGATCTGATGCACAGCCTACTGAACTAGAAGATGATTTTGGGGAAAAAGTTTCATGGTCTCAGAAGTCTTCATGGAGAGAACTTCTTGGTGACAAAGGCAATACTTCTTTCAGCGCTTCTCTCATATTGCCAAAGTTGGACTCTGGTGAGAGTCAACAAAGATCTGACGATCAATCCGCACCTGTATCTACAAACAACAAAACTGAAAACATGGAAAGGGATGGGCACCTAGGGAGCAAACCTGCCGATGCACCCGTGATAGAGGAGCATGCCGAAGCTCAACCTACCAATAAACAAGTGATAGAAGATGTTGCCAATAATAAGCATAATGTGGCACCTAATAAGACAGGCAGAGGAGCTTCATGGCTGCAAAAACAATCCTGGACACAAATGGTTGGTCAGAATAACAATTCATTTAGCATTTCAAATATTTTGCCTGGCATTACTTTCCCAGAGCCAATGGCCAAGGAGGCCATTATGGAACCTGCCATTTCCAATGATTGCAAGCACAATGGCGTAGCTAAGGATACTGTTAATGTTGTCTGTGATGGGTTTAACTCAAGGGAGACTATACCAGGAAAGAGTCAGCATACCAGTGCCAATGACATTGCTTCTGCTTCAGTAGGTGAGGAAAAAGGTGAAACAAGTCCGAGGGAAAAATCCACTGAAAATGTTGAAATAGGCGAAACTTGCTCATTTATGAGAAGTGCTGCATCTTTGAAGGAATGGGCAAAAGCTAAGGCTGCTATGAGTGGATCACTCAAAAGAAAACACGGTGAGAAGGGTGAGAAGGAAGATCGAAAGGTTCCCGTAAGGCGGAAATATGACGGTTGA	1848	0.4372	MEDEAEETKSAARIFVGGLAEAVSAEDLRSLFASLGSVQSVQTIRTKGRSFAYLDFLSDPKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREWEQGTLDDATQKPPTAASEEEMPNTAQSSKSNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHCKPFVPEREKLSIDRTAESGGINDEEISIMNAVMNKLFEKEQVSNAKNLGEEKDSFESPDALHSDECEDSATDEDDLIINVETKKNKTSLTEDKELQRILENQESWFNKRKIAKEEPNKSTLLVQKRSNSNPDKNKKRKSLPKLEVSTTPGSKSNMQTLPDEVGSDAQPTELEDDFGEKVSWSQKSSWRELLGDKGNTSFSASLILPKLDSGESQQRSDDQSAPVSTNNKTENMERDGHLGSKPADAPVIEEHAEAQPTNKQVIEDVANNKHNVAPNKTGRGASWLQKQSWTQMVGQNNNSFSISNILPGITFPEPMAKEAIMEPAISNDCKHNGVAKDTVNVVCDGFNSRETIPGKSQHTSANDIASASVGEEKGETSPREKSTENVEIGETCSFMRSAASLKEWAKAKAAMSGSLKRKHGEKGEKEDRKVPVRRKYDG*	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	225	241	-	-
	Gso9g0705	615	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	14	58	IPR000504	GO:0003723
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	385	420	-	-
	Gso9g0705	615	Gene3D	-	1	89	IPR012677	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	584	615	-	-
	Gso9g0705	615	SMART	rrm1_1	13	83	IPR000504	GO:0003723
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	385	406	-	-
	Gso9g0705	615	PANTHER	TRANSCRIPTIONAL REGULATOR	4	601	-	-
	Gso9g0705	615	CDD	RRM_NOL8	13	86	IPR034138	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	225	250	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	320	339	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	591	615	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	104	127	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	292	355	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	526	566	-	-
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	527	543	-	-
	Gso9g0705	615	SUPERFAMILY	RNA-binding domain, RBD	3	98	IPR035979	GO:0003676
	Gso9g0705	615	MobiDBLite	consensus disorder prediction	101	127	-	-
	Gso9g0705	615	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	12	87	IPR000504	GO:0003723

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g0705	Gso-Chr9	10149930	10154784	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g0705	-		-	gmx:100778779	1231.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g1579	15	21885119	21890079	Gso9g0705	9	10149930	10154784	GST