Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1579 ATGGAGGAGGAAGCGGAAGAAACGAAGAGCGCAGTGAGAATATTCGTCGGAGGATTGGCGGGAGCCGTGAGCGCCGAAGACCTTCGAAGCTTATTCGCGTCTCTGGGCTCCGTCCAATCCGTCCAAACCATCCGAACCAAAGGTCGCAGCTTCGCCTACCTCGACTTCCTATCCGACCCCAAATCCCTCTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAGGCTGAGGCTGGAGAAGGCCAAAGAAGACTATCTTGTGCGTTTGAAGAGAGAATGGGAACAAGGCGCTCTAGATGATGCTACTCAAAAACCACCTGCTGCTGCTATTGAGGAGGAAATTCCCAGCACCACACACTCTTCCGAGTCAAATACCAAACACCTCAATATTTTCTTTCCCAGATTGAGAAAGGTGAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTTCAGAATATTAAAGTTCCTCTACTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAGTCCTTTTGTCCCTGAAAGAGAAAAACTATCTATTGATAGGGCAGCTGATAGTGGTGCAATGAATGATGAAGAGATTAGCATAATGAATGCTGTGATGAACAAGCTATTGGGAAAACAAAAGGTTTCCAATGCCAAGAAACTTGGAGAGGAGAAGGGTTCTTTTGAATCACCTGATGCTTTACATTCTGATGAATGTGAAGATAGTGCAACAGATGAAGATGATCTCATTATCAACGTGGAGACAAAGAAAAATAAAACAGCTTTAACAGGGGACGAGGAACTTCAAAGGATCTTGGAAAACCAGGAATCATGGTTGAATAAGACAAAAATTGCTAAGGAAGAACCCAACAAGAGCATGCCTCCAGTGCAAAAAAGGAGTAATAGCAATCATGACAAGAACAAGAAGAGAAAATCACTTCCCAAATTGGAAGTGTCTACTACCCCTGGAAGCAAGAGTAATATGCAGATGCTTCCAGATGAGGTAGGATCTGGTGCACAGCCTACTGAACTAGAAGATGATTTTGGGGAAAAAGTTTCATGGTCTCAGAAGTCTTCATGGAGAGAACTTCTTGGTGACAAAGGCAATACTTCTTTCAGTGCTTCTCTCATATTGCCAAAGTTGGACTCTGGTGAGAGTCAACAAAGATCTGACGATCAATCCACACCCGTATCTACAAACAAAAAAACTGAAAACATGGAATGGGATGGGCACCTAGGGAGCAAACCTACGAATCCACACGTGATAGAGGAGCTTGTGGAAGCTCAACCTACCAATAAACAAGTGATTGAAGATGTTACCAATAATAAGCATAATGTGGCAGTGGCACCTAATAAGACAGGTCGAGGATCTTCATGGCTGCAAAAACAATCCTGGACACAAATGGTTAGTCAGAATAACAATTCATTTAGTATTTCAAATATTTTTCCTGGCATTACTTTCCCAGAGCCAATGGCCACGGAGCCCATTGTGGAACCTGCCATTTCCAATGATTGTAAGCATAATGGTGTAGCTAAGGATACTGTTAATGAAGTTGTCAGTGATGGGTTTAGCTCAAGGGAGACTATACCAGTAAAGAGTCAGCATACTGGTGCCGATGACATTGCTTCTGCTTCAGTAGTTGAGGAAAAAGTTGAAACAAGTCCAAGAGAAAAATCCTCTGAAAATGTTGAAATAGGCGAAACTTGCTCATTTATGAGAAGTGCTGCATCTTTGAAGGAATGGGCAAAAGCTAAGGCTGCTATGAGTGGATCACTCAAAAGAAAACGTGGTCAGAAGGAAGATCAGAAGGCTTAG 1824 0.4309 MEEEAEETKSAVRIFVGGLAGAVSAEDLRSLFASLGSVQSVQTIRTKGRSFAYLDFLSDPKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREWEQGALDDATQKPPAAAIEEEIPSTTHSSESNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPLLPVHFCDCEEHCSPFVPEREKLSIDRAADSGAMNDEEISIMNAVMNKLLGKQKVSNAKKLGEEKGSFESPDALHSDECEDSATDEDDLIINVETKKNKTALTGDEELQRILENQESWLNKTKIAKEEPNKSMPPVQKRSNSNHDKNKKRKSLPKLEVSTTPGSKSNMQMLPDEVGSGAQPTELEDDFGEKVSWSQKSSWRELLGDKGNTSFSASLILPKLDSGESQQRSDDQSTPVSTNKKTENMEWDGHLGSKPTNPHVIEELVEAQPTNKQVIEDVTNNKHNVAVAPNKTGRGSSWLQKQSWTQMVSQNNNSFSISNIFPGITFPEPMATEPIVEPAISNDCKHNGVAKDTVNEVVSDGFSSRETIPVKSQHTGADDIASASVVEEKVETSPREKSSENVEIGETCSFMRSAASLKEWAKAKAAMSGSLKRKRGQKEDQKA* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1579 607 MobiDBLite consensus disorder prediction 225 241 - -
Gso15g1579 607 PANTHER TRANSCRIPTIONAL REGULATOR 3 604 - -
Gso15g1579 607 Gene3D - 1 89 IPR012677 -
Gso15g1579 607 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Gso15g1579 607 CDD RRM_NOL8 13 86 IPR034138 -
Gso15g1579 607 MobiDBLite consensus disorder prediction 225 250 - -
Gso15g1579 607 MobiDBLite consensus disorder prediction 383 406 - -
Gso15g1579 607 SUPERFAMILY RNA-binding domain, RBD 3 99 IPR035979 GO:0003676
Gso15g1579 607 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 58 IPR000504 GO:0003723
Gso15g1579 607 MobiDBLite consensus disorder prediction 285 354 - -
Gso15g1579 607 SMART rrm1_1 13 83 IPR000504 GO:0003723
Gso15g1579 607 MobiDBLite consensus disorder prediction 383 421 - -
Gso15g1579 607 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1579 Gso-Chr15 21885119 21890079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1579 - - gmx:100808161 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1579 15 21885119 21890079 Gso9g0705 9 10149930 10154784 GST