Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0702 ATGAACTTCCGGTTCCAAAACCTCTTGGGCGCCCCCTACAGAGGGGGCAACGTGGTCATTTCCAGCAACACCGTGCTACTCTCCCCGGTCGGTAACCGCGTAGCCGTCACCGACCTCCTCAAGTCCGAAACCACCACGCTCCCCCTCCAGTCCTCCTCTAACGTCACCCGCATCACCGTCTCCCCCGACGCCACCTTCCTCCTCGCCATCGACGACCGCAACCGCTGCCTCTTCATCAACCTCCGCCGACGCGCCCTCCTCCACCGCATCACCTTCAAGCACCGCGTCGCCGCCTCGAAGTTCAGCCCCGACGGCGCCCTCATCGCTGTCGCCGCCGGGAAGCTCGTCCAGATCTGGCGTTCGCCGGCGTTTCGCCGCGAGTACTTCCCCTTTGAGCTCGTTCGGACCTTTGCGGACTTCGACGCGAAGGTCACCTCCCTCGATTGGAGCCCCGATTCGAAGTATCTTATCGCCGGGTCCAAGGATTTGACCGCGAGAATCTTGTGCTTGAAAAAATTGAACAGTGGTGGTGTTAAGAAAAGACCTTTTTTGCTATTAGGGCATAGGGATTCTGTTGTAGGTTCGTTTTTCGGTGTCAATTCGAAGACTAATAGGGTTTGTAAGGCTTATACGGTTAGTAGGGATTGTTATTTGTTTAGCTGGGGTTTTACTTCTGATGATGATGGTGAGGGTGAGGAAGATGGTGGTGAGGGTTTGGAACCTCCCTCGCCGGGGACGCCAGAGAGGGATGTGGAAGAGAATTTTGAGCTTAGTGAGAATGATGGTGTGAAGAAAATGAAGAAAATTAGTGAGAATGATGGTGTGAAGAAAAGAAAGAAAATTGATATTGAGGATGGTGATGAGGGTTACTTGAGTAGAGGGAAGTGGGAGTTATTGAGGAAGGATGGGTTTATGCAGGGATGGGCGAAGGTGACGGCGTGTGATTATCATAGAGGGCTGGATATGGTGGTTGTTGGATTTTCTAATGGTGTGTTTGGGTTGTATCAGATGCCGGATTTTGTGTGCATTCATTTGTTGTCTATTTCGAGGGAGAAGATTACCACTGCCGTGTTTAATGAGTTTGGCAACTGGTTGACCTTTGGCTGTGCCAAATTGGGACAGCTGCTTGTGTGGGAGTGGAGGTCTGAGAGCTACATTTTGAAGCAGCAGGGTCACTACTTTGATGTGAACTGCGTTGCGTATTCACCGGACTCGCAGCTCCTTGCAACTGGAGCAGATGATAATAAAGTGAAGGTGTGGACTCTTTCCTCAGGCTTTTGCTTTGTTACATTTTCTGAGCACACTAATGCTGTTACGGCTCTACATTTTATGCCAAGTAACAATGTCCTGCTTAGTGCATCTCTTGATGGGACCATTCGTGCATGGGACTTATTACGTTACCGGAATTTTAAGACGTTTACAACCCCTTCTCCAAGGCAGTTTGTTTCTTTGACAGCTGATATAAGTGGTGAAGTAATATGTGCTGGCACTTCAGATTCCTTTGAGGTTTTTGTTTGGTCAATGAAAACGGGGCGCTTGATGGATGTGCTTAGTGGTCATGAAGCTCCTGTCCATGGTCTGGTGTTTTCTCCTACGAATGCTGTCTTGGCTTCATCATCATATGACAAAACTGTTCGGCTGTGGAATGTCTTTGATGGAAAAGGAGCAGTTGAAACGTTTCCTCACACACACGATGTTCTTACTGTAGTTTATCGTCCAGATGGAAGGCAGTTAGCTTGCAGCACATTAGATGGGCAAATTCATTTTTGGGACCCAATAGATGGTTTGCTAATGTACACCATAGAAGGTTCTAGAGATATAGCTGGTGGGCGCCTTATGACTGACCGCAGATCAGCTGCTAACTCAACTTCAGGGAAGTTCTTTACAACCTTGTGTTTTTCAGCTGATGGAAGCTATATATTAGCTGGGGGAAGTAGCAGATACATCTGCATGTATGATGTTGCAGATCAGGTTTTGCTTCGACGTTTCCAGATAACTCACAATCTCTCATTAGATGGAGTGCTTGACATTTTAAACTCAAAGAATATGACAGAAGCTGGCCCACTAGATTTGATTGATGATGACAGCAGTGACATTGAAGAAGGTGTTGACAAACAAACACGAGGGAAGCTAGGATTAGACTTGCCAGGATCTATGCCTAACCGTGGAAGGCCTATTATTCAGACAAAAAGCCTGAGAATTGCATCTACAGGGCGTAGTTTTGTTGCAGCAACAACTGAGGGAGTTTTGGTTTATTCTGTTGATGAATCATTCATATTTGATCCAACTGACCTAGACATAAATGTTACACCAGAGGCTGTTGAAGAGGCTCTCCGGGAAAATCAACCAAGTAAAGCCTTGATCCTTAGCCTTCGCCTGAATGAGGATTCTTTCGTTAAAAAATGTATATTTGCGGTTAGTCCAGCAGATATTCCAGCCGTTGCCACATCAATCCCCTACAAATATATCCAGCGATTAGTTGAGGCACTTGCAGATCTTTTAGAAAACTGCCCACATTTGGAATTTATACTTAGATGGTCTCAGGAGCTCTGCAAAGCCCATGGGAATTCTATTCAGCAGAACTCTAGAAATCTGTTACCATCATTAAAATCTTTGCAGAAAGCAATCACTAGAATTCATCAAGATCTAGCAGATACATGTTCCTCCAATGAATATATGCTGCGATATTTATGTTCTTCTGGTGCCAAGAAATGA 2715 0.4641 MNFRFQNLLGAPYRGGNVVISSNTVLLSPVGNRVAVTDLLKSETTTLPLQSSSNVTRITVSPDATFLLAIDDRNRCLFINLRRRALLHRITFKHRVAASKFSPDGALIAVAAGKLVQIWRSPAFRREYFPFELVRTFADFDAKVTSLDWSPDSKYLIAGSKDLTARILCLKKLNSGGVKKRPFLLLGHRDSVVGSFFGVNSKTNRVCKAYTVSRDCYLFSWGFTSDDDGEGEEDGGEGLEPPSPGTPERDVEENFELSENDGVKKMKKISENDGVKKRKKIDIEDGDEGYLSRGKWELLRKDGFMQGWAKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNEFGNWLTFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCVAYSPDSQLLATGADDNKVKVWTLSSGFCFVTFSEHTNAVTALHFMPSNNVLLSASLDGTIRAWDLLRYRNFKTFTTPSPRQFVSLTADISGEVICAGTSDSFEVFVWSMKTGRLMDVLSGHEAPVHGLVFSPTNAVLASSSYDKTVRLWNVFDGKGAVETFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPIDGLLMYTIEGSRDIAGGRLMTDRRSAANSTSGKFFTTLCFSADGSYILAGGSSRYICMYDVADQVLLRRFQITHNLSLDGVLDILNSKNMTEAGPLDLIDDDSSDIEEGVDKQTRGKLGLDLPGSMPNRGRPIIQTKSLRIASTGRSFVAATTEGVLVYSVDESFIFDPTDLDINVTPEAVEEALRENQPSKALILSLRLNEDSFVKKCIFAVSPADIPAVATSIPYKYIQRLVEALADLLENCPHLEFILRWSQELCKAHGNSIQQNSRNLLPSLKSLQKAITRIHQDLADTCSSNEYMLRYLCSSGAKK* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0702 904 MobiDBLite consensus disorder prediction 228 251 - -
Gso9g0702 904 SUPERFAMILY Calcium-dependent phosphotriesterase 560 755 - -
Gso9g0702 904 SMART WD40_4 382 421 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 40 80 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 130 169 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 614 653 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 339 379 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 424 463 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 510 549 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 553 591 IPR001680 GO:0005515
Gso9g0702 904 SMART WD40_4 83 120 IPR001680 GO:0005515
Gso9g0702 904 ProSitePatterns Trp-Asp (WD) repeats signature. 450 464 IPR019775 -
Gso9g0702 904 PRINTS G protein beta WD-40 repeat signature 408 422 IPR020472 -
Gso9g0702 904 PRINTS G protein beta WD-40 repeat signature 450 464 IPR020472 -
Gso9g0702 904 PRINTS G protein beta WD-40 repeat signature 536 550 IPR020472 -
Gso9g0702 904 ProSitePatterns Trp-Asp (WD) repeats signature. 536 550 IPR019775 -
Gso9g0702 904 Pfam WD domain, G-beta repeat 512 549 IPR001680 GO:0005515
Gso9g0702 904 Pfam WD domain, G-beta repeat 390 420 IPR001680 GO:0005515
Gso9g0702 904 Pfam WD domain, G-beta repeat 134 167 IPR001680 GO:0005515
Gso9g0702 904 Pfam WD domain, G-beta repeat 427 463 IPR001680 GO:0005515
Gso9g0702 904 Pfam WD domain, G-beta repeat 563 591 IPR001680 GO:0005515
Gso9g0702 904 Gene3D - 490 685 IPR015943 GO:0005515
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 517 550 - -
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats profile. 517 558 IPR001680 GO:0005515
Gso9g0702 904 SUPERFAMILY DPP6 N-terminal domain-like 10 221 - -
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 389 425 - -
Gso9g0702 904 SUPERFAMILY WD40 repeat-like 127 596 IPR036322 GO:0005515
Gso9g0702 904 Pfam Dip2/Utp12 Family 794 899 IPR007148 -
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats profile. 431 472 IPR001680 GO:0005515
Gso9g0702 904 PANTHER WD40 REPEAT PROTEIN 1 901 IPR027145 -
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 559 591 - -
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats profile. 389 430 IPR001680 GO:0005515
Gso9g0702 904 Gene3D - 22 230 IPR015943 GO:0005515
Gso9g0702 904 CDD WD40 342 645 - -
Gso9g0702 904 Gene3D - 270 476 IPR015943 GO:0005515
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats profile. 559 591 IPR001680 GO:0005515
Gso9g0702 904 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 431 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0702 Gso-Chr9 10097765 10104066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0702 479 664 Miscellaneous Gene Families AT5G08390 20.619 2.54e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0702 K14558 - gmx:100526905 1778.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1577 15 21848431 21854451 Gso9g0702 9 10097765 10104066 GST