Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0654 ATGTTAGCTTCTTCTCTCTCCTTCCTCCATTCTTGTTCATCTTCCTCTTTCTTATTGTCAATTTCACTTCCTAATCCCAAACCCTCTCATTCCCTACCTTTCGTGCTCGAAGCCAAAGACAGGACCCGTAGGGAAGACAGGTCCGCGCGCCACACTCGCATCAGAAAGAAGGTCGAAGGGACACCCGAGAGGCCGAGGCTGTCCGTGTTCCGGTCGAACAAGCATCTCTCTGTGCAGGTGATAGATGACACCAAGATGCACACGCTCGCTTCGATTTCGACAATGCAGAAGACGGTTGCTGAAGAGTTCAACTACTCCGCTGGCCCTACACTTGAAGTAGCAAAGAGGATGGGTGAGATCATTGCGAAGTCCTGTTTAGAGAAGGGGATCACAAAGGTGGCCTTTGATCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCACTCGCTGAAGCAGCTCGTGAACATGGCCTAGATTTCTAA 483 0.5072 MLASSLSFLHSCSSSSFLLSISLPNPKPSHSLPFVLEAKDRTRREDRSARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTKMHTLASISTMQKTVAEEFNYSAGPTLEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0654 160 CDD Ribosomal_L18_L5e 54 158 - -
Gso9g0654 160 SUPERFAMILY Translational machinery components 43 158 - -
Gso9g0654 160 TIGRFAM L18_bact: ribosomal protein uL18 44 160 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gso9g0654 160 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 42 160 IPR005484 GO:0003735|GO:0005840|GO:0006412
Gso9g0654 160 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 30 160 IPR005484 GO:0003735|GO:0005840|GO:0006412
Gso9g0654 160 Hamap 50S ribosomal protein L18 [rplR]. 42 160 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gso9g0654 160 Gene3D - 41 160 - -
Gso9g0654 160 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 30 160 - -
Gso9g0654 160 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0654 Gso-Chr9 8439242 8441903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0654 K02881 - gmx:100306308 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1528 15 18602305 18605064 Gso9g0654 9 8439242 8441903 GST