Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1528 ATGCTAGCTTCTTCGCTCTCCTTCCTCCATTCTTGCACATCCCCCTCTTCCTCTTCCTTATTGTCAATTTCACCTCCAAACCCCAAACCCTCTCACTTCCTACCTTTCGTGGTCGAAGCCAAAGACAGGACCCGCAGGGAAGACAGGACCGCTCGCCACACTCGCATCAGAAAGAAGGTCGAAGGGACGCCCGAGAGGCCGAGGCTGTCCGTGTTCCGGTCGAACAAGCATCTCTCTGTGCAGGTGATTGATGACACCGCAATGCGCACGCTTGCTTCGGTGTCGACAATGCAGAAGACGGTTGCTGATGAGTTCAACTACTCCGCTGGCCCTACAGTTGAAGTAGCAAAGAGGATGGGTGAGATCATTGCAAAATCCTGTTTGGAGAAGGGGATCACAAAGGTTGCCTTTGATCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCCCGTGAACATGGCCTAGATTTCTAA 489 0.5276 MLASSLSFLHSCTSPSSSSLLSISPPNPKPSHFLPFVVEAKDRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTAMRTLASVSTMQKTVADEFNYSAGPTVEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1528 162 CDD Ribosomal_L18_L5e 56 160 - -
Gso15g1528 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Gso15g1528 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gso15g1528 162 SUPERFAMILY Translational machinery components 45 160 - -
Gso15g1528 162 TIGRFAM L18_bact: ribosomal protein uL18 46 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gso15g1528 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 - -
Gso15g1528 162 Gene3D - 43 162 - -
Gso15g1528 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1528 Gso-Chr15 18602305 18605064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1528 K02881 - gmx:100778569 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1528 15 18602305 18605064 Gso9g0654 9 8439242 8441903 GST