Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0587 ATGGCGCGGTTGATCACAGTGGTGTGGTGCGCGGTGGCGGTGCTATTATGCGCCGCGGCCGGTGCGTCGTGGGTGGAGGAGGCGGCGAACCCGATACGAATGGTGTCTGGCGTGGAGGCGGAGGTGGTTCGGGTGATCGGGGAGTGCCGGCGTGCGTTGAAGTTTGCTAGGTTCGTGAGCAGGTTCGGGAAGAGTTACCAAAGCGAGGAAGAGATGAAGGAGAGGTACGAGATATTCTCGCAGAATCTCAGGTTCATCCGCTCCCACAACAAGAAGCGTTTGCCCTATACTCTCTCTGTTAATCATTTTGCTGATTGGACTTGGGAGGAGTTCAAAAGACACAGACTAGGAGCTGCCCAAAATTGCTCTGCCACTCTTAACGGCAACCACAAGCTCACCGATGCTGTTCTTCCTCCAACGAAAGACTGGAGAAAAGAAGGTATAGTGAGTTCAGTTAAAGATCAAGGCAGCTGCGGATCATGCTGGACATTCAGCACAACTGGGGCTTTAGAAGCAGCCTATGCACAAGCATTTGGGAAGAGTATCTCTCTTTCTGAGCAGCAGCTAGTGGACTGTGCTGGCCCTTTCAACAACTTTGGCTGCCATGGTGGGTTGCCATCACAAGCCTTTGAGTACATTAAATACAATGGTGGACTAGAGACAGAGGAAGCATATCCCTACACAGGAAAAGATGGTGTCTGCAAATTCTCAGCTGAAAATGTTGCTGTTCAAGTCCTTGACTCTGTGAATATCACCTTGGGTGCTGAAGATGAACTAAAACATGCAGTTGCATTTGTTCGGCCAGTTAGTGTGGCCTTTCAGGTGGTGAATGGGTTCCATTTCTACGAGAATGGAGTTTTCACTAGTGACACTTGTGGTAGCACTTCCCAGGATGTGAACCATGCCGTTCTTGCTGTTGGATATGGAGTTGAAAATGGTGTCCCATATTGGCTCATAAAAAATTCATGGGGAGAAAGCTGGGGTGAAAATGGCTACTTCAAGATGGAATTGGGGAAGAACATGTGTGGTGTTGCAACTTGTGCATCTTATCCAATTGTGGCATAA 1065 0.4911 MARLITVVWCAVAVLLCAAAGASWVEEAANPIRMVSGVEAEVVRVIGECRRALKFARFVSRFGKSYQSEEEMKERYEIFSQNLRFIRSHNKKRLPYTLSVNHFADWTWEEFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGALEAAYAQAFGKSISLSEQQLVDCAGPFNNFGCHGGLPSQAFEYIKYNGGLETEEAYPYTGKDGVCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQVVNGFHFYENGVFTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGESWGENGYFKMELGKNMCGVATCASYPIVA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0587 354 PRINTS Papain cysteine protease (C1) family signature 155 170 IPR000668 GO:0006508|GO:0008234
Gso9g0587 354 PRINTS Papain cysteine protease (C1) family signature 301 311 IPR000668 GO:0006508|GO:0008234
Gso9g0587 354 PRINTS Papain cysteine protease (C1) family signature 316 322 IPR000668 GO:0006508|GO:0008234
Gso9g0587 354 SMART Inhibitor_I29_2 55 111 IPR013201 -
Gso9g0587 354 Pfam Cathepsin propeptide inhibitor domain (I29) 55 111 IPR013201 -
Gso9g0587 354 PANTHER THIOL PROTEASE ALEURAIN 31 351 - -
Gso9g0587 354 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 299 309 IPR025660 -
Gso9g0587 354 SUPERFAMILY Cysteine proteinases 50 352 IPR038765 -
Gso9g0587 354 CDD Peptidase_C1A 138 351 IPR039417 -
Gso9g0587 354 Gene3D Cysteine proteinases 46 353 - -
Gso9g0587 354 Pfam Papain family cysteine protease 137 352 IPR000668 GO:0006508|GO:0008234
Gso9g0587 354 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 155 166 IPR000169 -
Gso9g0587 354 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 316 335 IPR025661 -
Gso9g0587 354 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 351 - -
Gso9g0587 354 SMART pept_c1 137 352 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0587 Gso-Chr9 6975923 6980629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0587 K01366 - gmx:547734 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1471 15 16955921 16961058 Gso9g0587 9 6975923 6980629 GST
Gso17g0405 17 3730337 3733066 Gso9g0587 9 6975923 6980629 PCT
Gso9g0587 9 6975923 6980629 Gso17g0405 17 3730337 3733066 PCT