Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0567 ATGATGTTGTCGAGAATGGAGGCTGGGAAGAAGGGTGGTGGGGGTTCTAGTAACCAGAAGAAGTTGTTGAAGGATGTTGAAACCATGAACAAAGCTTTGTACTTGGATAGAAACTCTTCAAGGAGTTCAATACCTAGTGCAAATTCTAGATCTAAATTCACAGGGAAACCTCAGTTGCCTGATCCAAGATCCAAGTCTAAAGCCAGTAATGATCATAATGGTGAGAATGCTCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCATTAAGGGCCCTTTCGCACATTCGAAATAAGAGGTTCAATTGTAGTTTTTATCTGCAAGTTCATTTGATTGAGGGGTTGCCGCCGAGTTTTGATGATGCCGGCCTTGCTGTTTACTGGAAGAGGCGGGACGGGGTTCTCGTGACCCAGCCGGCCAAGGTGGTTCAGTGTGTGGCTGAATTTGAGGAGAAGTTGACCTACACTTGTTCGGTGTATGGAAGCAGGAGCGGACCTCACCATTCTGCAAAGTATGAAGCGAAGCATTTTTTGCTCTATGCTTCGCTTCTCAGTGTGCCGGAGATGGATTTGGGGAAGCACCGGGTGGATCTGACGAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTAATGGGATTGGCCAAGGGCGCTACGATGAATGTCAGTTTTGGGTATACTGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGCCTTCCGAAAGCATTGTCCTCCAGGCAGAATAGTTTTTCTCTGACTCCGACGAAGTTTGATGTTAAACCCAGACAGTTTGATGGAAGCAGCACGATGAGACGTGCCACAAGTTTGCAATACTCACCTCAAGCTTCTGACGAGGTAAAGGATCTTCATGAGGTGTTGCCATTAACTAAGTCAGCACTAGCTAGCTCAATAAACGTCTTATATAAGAAATTGGATGAAGAAAAGTTATGTAGCCCTCAGGATGATAAGACAGAACTTGATTCATTCACAGAAAATCTTGGGCCAATCAAGCCAGATGCCTATGCTTCTGATCTTGGAAAAGAAAGGCTTGAAGAGCATGCGACTAAGGATGAAAGTACATGTGACAAACCTGAACTCTATGTATTTCAAGAAAAGCTGGAGACAGTTAAACCAGATGGCTATTCTTTACCAGATTTTGGAAACAAAAACCCTGAACAGTGTCATGATAATGAATTTTTTGTTGTCGATAAGGGCATAGAACTTTCATCAAACGAACCTGTTAAACTAGAGGAATCCATCATAAAGGCTCCCGACGATGCTTCTACGGTTGATACTGTCTGTACCCTTGGTATATCAGGTATACAAATATCTTCTGAAGATAGTGTTAAACATGATTTTCTGGATGAGGCAAATGATAGTTCTAAGGATCAAGGAGTGGTAGAGGAATTTGCTAGCATAAAGGCTCCTGAGGATGCTTCTACAGTTGATACTTCGTGTACCCTTGGTATATCAGGCACACAAGTATCTTCTGAAGATAGTGTTGAACATGATTTTTTGGATGAGGCAAATGGCTTGGACACTAATGAGCTGCTCATGCAAGAACTAGAATCTGCTTTAAATAGTGTCTCGAATTTGGAGAGAGTGGCACTAGAATCTCCTAAAACTACAGAAGCGAAATCGGAACATAAAATGACAAAGTCACATAGCTTGGATGATGTTACAGCATCTGTTGCCACTGAATTTTTAAGCATGTTAGGCTTAGACCACAGTCCAATGGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAAGCTCTGAATGGGGGCTTCTCTTCTTTGTTTGATTTTGACATGAACTATGATAGTGAAGCAGCTGGTGGCTATGATGCTTCTGCTTCTTCTGAGCAGTGGAACTTTTCTGAAGGTGTCAAGTCATCATCCTTCTTGCAAGATCTGCCGGAGGAGCCTCCAGTTGAATCTCAGGATGTTAGGAGCAAACAGAGGGCTCAAATGCTAGAAGACTTGGAAACAGAAGCCTTGATGCGTCAATGGGGTTTGAATGAGAATGCTTTTCATCATTCTCCACCGAAAGATTTTGCTGGTTTTGGAAGTCCAATTCATTTACCACCTGAAGAGCCTCCCACATTGCCTCCTCTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGATGGGGGTTTTCTACGCACTATGAGTCCCTCAATTTTCAAGAATTCTAAAAGTTGTGGGAGCTTAATCATGCAGGTATCCAACCCTGTTGTGGTACCCGCAGAAATGGGTTCTGGGATAATGGAGGTTTTGCAGTGTTTGGCATCAGTGGGTATTGAAAAGCTCTCAATGCAGGCAAAGGAGTTAATGCCGCTGGAAGATATCACAGGGAAGACAATGCAACAGATAGCATGGGAAGCTATGCCTTCCTTAGAGGGTGCAGAGAGGCAATGCCATTTGCAGCATGATCCAATAACAGTGCCAGACAGTGCTGGTGTGCAAAGGGACTTGAAAGGAATGCCATCTAAACAAAAGTCTGGCAAGTTTAGTTCAAGGACAGTGGCCAACCAAACAGGCTCGGAGTTTGTTTCAGTAGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCGGAAGAGGAAGCACCATCAAACATTATTGCTCAGTCCATTGGAGATATTTCAGCTCTCCAGGGCAAGGGGGTTGATATTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGCTGATGGATGTAAAAGACGGTGGTGATGGTGTTGATGGGATAATGAGCTTATCATTAACTCTTGATGAATGGATGAAGCTGGATTCAGGTGAGATTGATGATATAGATAATATCAGTGAGCACACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCAAAGGGAGAGAAGAGACGAGGCAAAAGCAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGATCCTATGAGAAACTATGAGCCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATACTTCCAAAGCAAAGAATTTTCTACAGTGTGTCTGAGATAAGGAAAAATTATTATGAGGATGACGAGAGCAAAATAGTAGCAAAATTGAAGACGAAGGACACCGAGAAAGAGGAGAAAAGTTCTGAAGAGGAAGGGGGCATTCCTCAGTTCAGAATCACTGAAGTCCATGTGGCAGGTCTGAAGCCTGAGCCTCAGAAAAAGAAGCTTTGGGGCACTTCAAGCCAGCAACAGTCTGGTTCTCGCTGGTTGCTCGCCAATGGAATGGGGAAGAGCAATAATAAGCTTTCACTGATGAAGTCAAAGGCTGCGTCTAAATCTAATGCTCCAGTTACCACAAAGGGGCAACCTGGTGACAGCTTGTGGAGCATATCATCTCGTATTGATGGTGCTCGAGGAAAATGGAAGGAGTTGGCTGCACTAAATCCACATATAAGAAACCCCAATGTCATTTTACCAAATTGA 3630 0.4402 MMLSRMEAGKKGGGGSSNQKKLLKDVETMNKALYLDRNSSRSSIPSANSRSKFTGKPQLPDPRSKSKASNDHNGENAQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDDAGLAVYWKRRDGVLVTQPAKVVQCVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSVPEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLMGLAKGATMNVSFGYTVVGDNASATRDSLPKALSSRQNSFSLTPTKFDVKPRQFDGSSTMRRATSLQYSPQASDEVKDLHEVLPLTKSALASSINVLYKKLDEEKLCSPQDDKTELDSFTENLGPIKPDAYASDLGKERLEEHATKDESTCDKPELYVFQEKLETVKPDGYSLPDFGNKNPEQCHDNEFFVVDKGIELSSNEPVKLEESIIKAPDDASTVDTVCTLGISGIQISSEDSVKHDFLDEANDSSKDQGVVEEFASIKAPEDASTVDTSCTLGISGTQVSSEDSVEHDFLDEANGLDTNELLMQELESALNSVSNLERVALESPKTTEAKSEHKMTKSHSLDDVTASVATEFLSMLGLDHSPMGLSSESEPESPRELLLRQFEKEALNGGFSSLFDFDMNYDSEAAGGYDASASSEQWNFSEGVKSSSFLQDLPEEPPVESQDVRSKQRAQMLEDLETEALMRQWGLNENAFHHSPPKDFAGFGSPIHLPPEEPPTLPPLDDGLGPFLQTKDGGFLRTMSPSIFKNSKSCGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPSLEGAERQCHLQHDPITVPDSAGVQRDLKGMPSKQKSGKFSSRTVANQTGSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDISGSLGLDGAAGLQLMDVKDGGDGVDGIMSLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRCGLLGNNFTVALMVQLRDPMRNYEPVGTPMLALIQVEREFILPKQRIFYSVSEIRKNYYEDDESKIVAKLKTKDTEKEEKSSEEEGGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKAASKSNAPVTTKGQPGDSLWSISSRIDGARGKWKELAALNPHIRNPNVILPN* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0567 1209 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 242 IPR019448 -
Gso9g0567 1209 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Gso9g0567 1209 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1209 IPR039614 -
Gso9g0567 1209 ProSiteProfiles LysM domain profile. 1166 1209 IPR018392 -
Gso9g0567 1209 MobiDBLite consensus disorder prediction 842 867 - -
Gso9g0567 1209 Coils Coil 529 549 - -
Gso9g0567 1209 MobiDBLite consensus disorder prediction 33 55 - -
Gso9g0567 1209 CDD LysM 1171 1208 IPR018392 -
Gso9g0567 1209 MobiDBLite consensus disorder prediction 1156 1177 - -
Gso9g0567 1209 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1209 - -
Gso9g0567 1209 MobiDBLite consensus disorder prediction 65 81 - -
Gso9g0567 1209 MobiDBLite consensus disorder prediction 1 81 - -
Gso9g0567 1209 Gene3D LysM domain 1157 1209 IPR036779 -
Gso9g0567 1209 Pfam LysM domain 1171 1208 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0567 Gso-Chr9 6546169 6550719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0567 - - gmx:100806958 2232.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1427 15 15914551 15919158 Gso9g0567 9 6546169 6550719 GST