Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1427 ATGATGTTGTCGAGAATGGAGGCTGGGAAGAAGGGTGGTGGGGGTTCTAGTAACCAGAAGAAATTGTTAAAGGATGTTGAAACCATGAACAAAGCTTTGTACTTGGATAGAACCTCTTCAAGGAGTTCAATACCTAGTGCAAATTCTAGATCTAAATTCACAGGGAAACCTCAGTTGCCTGATCCCAAATCCAAGTCTAAAGCCAGTGGTGATAATAATAGTGAGAATGTTCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCACTAAGGGCACTCTCGCACATCCGAAATAAGAGGTTCAATTGTAGTTTTTATCTCCAAGTTCATTTGATTGAGGGGTTGCCTCCGAGTTTTGATGATGCTAGCCTTGCTGTGTACTGGAAGAGGCGCGATGGGGTTCTTGTGACCCAGCCGGCCAAGGTGGTTCAGCGTGTGGCTGAATTTGAGGAGAAGTTGACCTACACTTGCTCGGTGTATGGAAGCAGGAGCGGACCTCACCATTCTGCAAAGTATGAAGCAAAGCATTTTTTGCTCTATGCTTCACTTCTCAGTGTGCCAGAGATGGATTTGGGGAAGCACCGGGTGGATCTGACAAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTAACGGGAGTGGCTAAGGGTGCTGCGATGAATGTCAGTTTTGGGTATACGGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGCCTTCCTAAAGCATTGACCTCCAGGCAGCATAGTTTTGCTCCGACTCCGACAAAGTTAGATGTTAAACCCAGACAGTTTGATGGAAGCAGCAAGATGAGACGGGCCACAAGTTTGCAATACTCATCTCAAGCTGCAGATGAGGTGAAGGATCTTCATGAGGTATTGCCATTAACTAAGTCAGCATTAGCCAGCTCAATAGACGTCTTATATACGAAATTGGATGAAGAAAAGGCTTGTAGTCCTCTGGATGATGAGGCAGAACTTGATTCCTTCAATCTTGGGCCAATCAAGCCAGATGCCTATGCTTCTGATCTAGGAAAAGAAAGGCTTGAAGAGCATGCAACTAAGGATGAAAATACATGTCCAGTGGATGACAAACCTGAACCCTACGTATTTCAAGAAAAGCTGGAGACAGTTAAACCAGATGGCTATTCTTTACCAGATTTTGAAAATGAAAACCCCGAACATTGTCTTGATAATGATTTTTTTGTTGTTGATAAGGGCATAGAACTTTCATCAAACGAATCTGTTAAACTAGAGGAATCCATCATAAAGGCTCCTGACGATGCTTCTACAGTTGATAGTGCCAGTACCCTTGGTATATCAGGTATACAAATATCTTCTGAAGATAGTGTTAAGCATGATTTTCTGGATGATGCAAATGATAGTTCTAAGGATCAAGCAGTGGTAGAGGAATTTGCTAGCATAAAGGCTCCTGAGGATGCTTCTACAGTTGATGCTTCCTGTACCCTTGGTATATCAGGTATACATGTATCTTCTGAAGATAGTGTTAAACACGATTTTCTGGATGAGGCAAATGGCTTGGACACTAATGAGCTGCTCATGCAAGAACTAGAATCTGCTTTAAATAGTGTCTCAAATTTGGAGAGAGTGGCACTAGAATCTCCTAAAACTGTAGAAGCGAAATTGGAATTTAAAATGACAAAGTCACATAGCTTGGATGATGTTACAGCATCTGTTGCCACTGAATTTTTAAGCATGTTAGGCTTAGACCATAGTCAAATGGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTCTGAATGGGGGCTTCTCTTCTTTGTTCGATTTTGACATGAACTATGATAATGAAGCAGATGGTGGCTATGATGCTTCTGCTGCTTCTGAGCAGTGGAACTTTTCTGAAGGTGTCAAGTCGTCATCCTTCTTGCAAGATGATCTGCAGGAGGAGCATCCAGTTGAGTCTCAGGATGTGAGGAGCAAACAGAGGGCTCAAATGCTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAATGGGGTTTGAATGAGAAGGCTTTTCATCATTCTCCACCAAAAGATTTTGCCGGTTTTGGAAGTCCAATTCATTTACCACCTGAAGAGCCTCCCACATTGCCTCCACTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGACGGGGGTTTTCTACGCTCTATGAATCCCTCAATTTTCAAGAATTCTAAAAGTGGTGGGAGCTTAATCATGCAGGTATCCAACCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGGATAATGGAGGTTTTGCAGTGTTTGGCTTCAGTGGGTATTGAAAAGCTCTCAATGCAGGCAAAGGAGTTAATGCCACTGGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGTCTTAGAGGGTGCAGAGAGGCAATGCCATTTGCAGCATGATCCAATAACATGGCCAGACAGTGCTTATGTGCAAAGGGACTTGAAAGGAATGCCATCTAAACAAAAGTCTGGCAAGTTTAGTTCAAGAACAGTGGCCAACCAAACAGGCTCAGAGTTTGTTTCAGTAGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCAGAAGAGGAAGCACCGTCAAACATCATTGCTCAGTCCATTGGAGATATTTCAGCTCTCCAAGGCAAGGGGGTTGATGTTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGTTGATGGATGTAAAGGACAGTGATGATGGTGGTGATGGTGTTGATGGGATAATGAGCCTATCATTAACTCTTGATGAATGGATGAAGCTGGATTCTGGTGAGATTGATGATATAGATAATATCAGTGAGCACACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCAAAGGGAGAGAAGAGACGAGGCAAAAGCAGAAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGATCCTCTGAGAAACTATGAGCCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAGAATTTTCGACAGTGTGTCTGAGATTAGGAAAAACTATGATGAGGATGACGAGAGCGAAATAGTAGCAAAGGTGGAAATGAAGGACACTGAGAAAGAGGAGAAAAGTTCTGAGGAGGACGAGGGCATTCCTCAGTTCAGAATCACTGAAGTCCATGTGGCAGGTCTAAAGCCTGAGCCTCAGAAAAAGAAGCTCTGGGGCACTTCAAGCCAGCAACAGTCTGGTTCTCGCTGGTTGCTCGCTAATGGAATGGGGAAGAGCAATAATAAGCTTTCACTAATGAAGTCAAAGGCTGCATCAAAATCTAATGCTCCAGTTACCACAAAGGGGCAACCTGGTGGTGACTCCTTGTGGAGCATATCATCTCGTATTGATGGCGCTCGAGGAAAATGGAAGGAGTTGGCAGCACTAAATCCACATATAAGAAACCCCAATGTCATTATACCAAATTGA 3651 0.4396 MMLSRMEAGKKGGGGSSNQKKLLKDVETMNKALYLDRTSSRSSIPSANSRSKFTGKPQLPDPKSKSKASGDNNSENVQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDDASLAVYWKRRDGVLVTQPAKVVQRVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSVPEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLTGVAKGAAMNVSFGYTVVGDNASATRDSLPKALTSRQHSFAPTPTKLDVKPRQFDGSSKMRRATSLQYSSQAADEVKDLHEVLPLTKSALASSIDVLYTKLDEEKACSPLDDEAELDSFNLGPIKPDAYASDLGKERLEEHATKDENTCPVDDKPEPYVFQEKLETVKPDGYSLPDFENENPEHCLDNDFFVVDKGIELSSNESVKLEESIIKAPDDASTVDSASTLGISGIQISSEDSVKHDFLDDANDSSKDQAVVEEFASIKAPEDASTVDASCTLGISGIHVSSEDSVKHDFLDEANGLDTNELLMQELESALNSVSNLERVALESPKTVEAKLEFKMTKSHSLDDVTASVATEFLSMLGLDHSQMGLSSESEPESPRELLLRQFEKEALNGGFSSLFDFDMNYDNEADGGYDASAASEQWNFSEGVKSSSFLQDDLQEEHPVESQDVRSKQRAQMLEDLETEALMREWGLNEKAFHHSPPKDFAGFGSPIHLPPEEPPTLPPLDDGLGPFLQTKDGGFLRSMNPSIFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPVLEGAERQCHLQHDPITWPDSAYVQRDLKGMPSKQKSGKFSSRTVANQTGSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDVSGSLGLDGAAGLQLMDVKDSDDGGDGVDGIMSLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQRIFDSVSEIRKNYDEDDESEIVAKVEMKDTEKEEKSSEEDEGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKAASKSNAPVTTKGQPGGDSLWSISSRIDGARGKWKELAALNPHIRNPNVIIPN* 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1427 1216 CDD LysM 1180 1215 IPR018392 -
Gso15g1427 1216 Pfam LysM domain 1180 1215 IPR018392 -
Gso15g1427 1216 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 240 IPR019448 -
Gso15g1427 1216 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Gso15g1427 1216 Coils Coil 530 550 - -
Gso15g1427 1216 Gene3D LysM domain 1178 1216 IPR036779 -
Gso15g1427 1216 MobiDBLite consensus disorder prediction 1162 1184 - -
Gso15g1427 1216 MobiDBLite consensus disorder prediction 1 80 - -
Gso15g1427 1216 MobiDBLite consensus disorder prediction 1162 1185 - -
Gso15g1427 1216 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1216 IPR039614 -
Gso15g1427 1216 MobiDBLite consensus disorder prediction 33 55 - -
Gso15g1427 1216 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1427 Gso-Chr15 15914551 15919158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1427 - - gmx:100815106 2253.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1427 15 15914551 15919158 Gso9g0567 9 6546169 6550719 GST