Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0557 ATGGAGTGCGTTGCGGCGAGGAACTTGGCGGCAATGGCGTTCTGCGTGAGTCCTTTGTCGTCGAGGTTGAGGCTGCGGAGGAAGAAGCTGTGGAGAAGACGAACCGCGTCGTCGTCGTCGTCGTGCGGCGGCCGCGGCGTGCGGTGTCTGAAGGTGGAGGCGAAGGCCGGGAGCGAGAGCTGCGTGGCGACGAAAGAGGACTTCGCCGACGAGGAGGATTACGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTCCAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGCGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCAGAATCAGCCAAGTTAGGACTGAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTATCTCGACAATAAGGACCCCATTTTTATTGGTCGTTCCTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAGTTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTGTTATTGAGACGAGTAATGGTCATAGTCATGTTGTCTGTGAATATGACGTTGTAGTGCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCAGGGAAACTGTTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCCAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAAAGTGTTCTTTGAGGAAACCTGTTTAGCATCAAAAGATGCTATGCCATTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTAAATACAATGGGGATCAGAATTAAGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCCTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCTACAGGGTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGTCATGCCAAGGACATCATTACTCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCTCAAGAACGGAAACGGCAGAGAGCATTCTTTCTTTTTGGATTAGCCCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCCCTCTCATCTACAGATCTTGTATTATTTGCATTCTACATGTTCATAATAGCACCAAATAACTTAAGAATGGGTCTAGTCAGACATCTACTTTCGGATCCTACTGGTGCAACTATGATAAAGACTTACTTAACGATATAG 1599 0.4547 MECVAARNLAAMAFCVSPLSSRLRLRRKKLWRRRTASSSSSCGGRGVRCLKVEAKAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVESVIETSNGHSHVVCEYDVVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCPEANYPTFLYAMPMSRTKVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRIKKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLVRHLLSDPTGATMIKTYLTI* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0557 532 TIGRFAM carotene-cycl: lycopene cyclase family protein 112 512 IPR010108 GO:0016117|GO:0016705
Gso9g0557 532 PANTHER - 7 491 - -
Gso9g0557 532 PRINTS Pyridine nucleotide disulphide reductase class-I signature 112 134 - -
Gso9g0557 532 PRINTS Pyridine nucleotide disulphide reductase class-I signature 242 251 - -
Gso9g0557 532 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 7 491 - -
Gso9g0557 532 SUPERFAMILY FAD/NAD(P)-binding domain 110 505 IPR036188 -
Gso9g0557 532 Pfam Lycopene cyclase protein 112 509 - -
Gso9g0557 532 Gene3D - 111 471 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0557 Gso-Chr9 6369383 6380173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0557 K06444 - gmx:100790686 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1418 15 15765782 15773546 Gso9g0557 9 6369383 6380173 GST