Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1418 ATGGAGTGCGTTGCAGCGAGGAACTTGGCGGCAATGGCGTTTTGCGTGAGTCCTTCGTCGTCGAGGTTGAGGTTGCGACGGAAGAAGCTGTGGAGAAGACGAGCCGCGTCGTCCTCGTCGTCGTGCGGCGGCGGCCGCGGCGTGCGGTGGCTGAAGGTGGAGGCAAAGGCGGGGAGCGAGAGCTGCGTTGCGACCAAAGAGGACTTCGCCGATGAGGAGGATTATGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTACAAATGCAACAGAAGAAAGCCATGGAAATGCAGTCCAAGCTCGCGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCTGAATCAGCCAAGTTAGGACTGAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTTTCTTGACAATAAGGACCCCATTTTTATTGGTCGTTCCTATGGACGTGCCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTATTGAGGCAACCAATGGTCATAGTCATGTTGTCTGTGAATATGACATTGTAGTTCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCAGGGAAACTGCTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCCAGAAGCAAATTTTCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTAGCGTCAAAAGATGCCATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCAAGATTAAATACAATGGGGATCAGAATTACGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCGTTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGGTACTCTGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGCCATGCCAAGGACATTATTACACAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACCCTTTGGCCTCAAGAAAGGAAACGCCAGAGAGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCATCTACAGATCTTGTATTATTTGCATTCTACATGTTCATAATAGCACCAAATAACTTGAGAATGGGTCTAGTCAGACATCTGCTTTCGGATCCTACTGGTGCAACCATGATAAAGACTTACTTAACGATATAA 1602 0.4532 MECVAARNLAAMAFCVSPSSSRLRLRRKKLWRRRAASSSSSCGGGRGVRWLKVEAKAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQKKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVFLDNKDPIFIGRSYGRASRHLLHEELLRRCVESGVSYLSSRVESIIEATNGHSHVVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCPEANFPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLVRHLLSDPTGATMIKTYLTI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1418 533 SUPERFAMILY FAD/NAD(P)-binding domain 111 506 IPR036188 -
Gso15g1418 533 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 7 492 - -
Gso15g1418 533 PANTHER - 7 492 - -
Gso15g1418 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 113 135 - -
Gso15g1418 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 243 252 - -
Gso15g1418 533 Pfam Lycopene cyclase protein 113 510 - -
Gso15g1418 533 Gene3D - 112 472 IPR036188 -
Gso15g1418 533 TIGRFAM carotene-cycl: lycopene cyclase family protein 113 513 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1418 Gso-Chr15 15765782 15773546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1418 K06444 - gmx:100788180 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1418 15 15765782 15773546 Gso9g0557 9 6369383 6380173 GST