Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0520 ATGAATATGTACCAATTGCAACAGTTTCATATTCAACCCATGATGATGAAGATGGATAATACGATGAGGAAGAGGGAGAGAAGCAAGGCCATGGAGAAAGAGAGGCTTCATGTGATGGACTTGAGTGGCATGTCCTTGGAGTTTCTTCCCAAACCTTCGCTTGATTTAGCCACCATTTGCAAGTTGGACCTATCTAATAACAATCTCCAGGAAATTCCGGAATCCTTAACGGCAAGACTTCTAAACGTGGAAGTGTTGGACGTGCGTTCCAACCAGCTAAAGTCCCTTCCTAATTCCATTGGCTGCCTTTCTAAGCTCAAGGTTTTGAATGTCTCAGGCAACTTCATCGAATCCCTCCCCAAAACCATTGAGAATTGCAGAGCCTTAGAAGAACTGAATGCAAACTTCAACAAGCTGAGCAAGCTTCCAGACACAATAGGGTTTGAGCTCGTAAACCTAAAGAAGCTCTCAGTGAACTCCAACAAGCTTGTGTTTCTTCCAAGCTCCACTTCACACTTAACAGCTTTGAAGGTTCTTGATGCACGCTTGAATTGCCTAAGGGCACTTCCAGAGGACCTTGAGAACCTTATCAACCTAGAAACTCTAAATGTGAGCCAGAACTTCCAGTATTTGGACACCCTCCCTTACTCCATAGGGCTTCTCTTGTCACTCATTGAACTTGATGTTAGTTACAACAACATCAAGACCTTGCCTGAGTCAATTGGGTGCCTCAAGAATCTTCAGAAGCTGAGTGTTGAAGGGAACCCTCTTACTTGCCCCCCTATGGAGGTGGTGGAGCAAGGACTTCATGTGGTGATGGAGTACATGCATCATAAGATGAACTCAAGTGATCAAAACAAAACTAAGAAAAGGTGGTGGATTGGGAAGATTGTGAAGTGTGGAACCTTCAATAAACAAATGAGAGGTGGGAAACGACCAGAAAATGAGGGTTACAACATGCTTAAGCACCAGAATATCAATGGCCTTGCTTCCCCGGGTCTCATGGGAATGCTCTCACCTCTGCGCCTCTTCTCTCCCCGTCATTCACCCCGTCGTTCCTTCGGTTGA 1068 0.4513 MNMYQLQQFHIQPMMMKMDNTMRKRERSKAMEKERLHVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELVNLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLDTLPYSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEYMHHKMNSSDQNKTKKRWWIGKIVKCGTFNKQMRGGKRPENEGYNMLKHQNINGLASPGLMGMLSPLRLFSPRHSPRRSFG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0520 355 ProSiteProfiles Leucine-rich repeat profile. 105 126 IPR001611 GO:0005515
Gso9g0520 355 SUPERFAMILY L domain-like 34 260 - -
Gso9g0520 355 ProSiteProfiles Leucine-rich repeat profile. 58 79 IPR001611 GO:0005515
Gso9g0520 355 Gene3D Ribonuclease Inhibitor 209 280 IPR032675 -
Gso9g0520 355 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 346 - -
Gso9g0520 355 ProSiteProfiles Leucine-rich repeat profile. 82 103 IPR001611 GO:0005515
Gso9g0520 355 SMART LRR_typ_2 150 172 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 127 149 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 173 196 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 103 126 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 80 102 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 56 79 IPR003591 -
Gso9g0520 355 SMART LRR_typ_2 221 244 IPR003591 -
Gso9g0520 355 SMART LRR_bac_2 56 75 - -
Gso9g0520 355 SMART LRR_bac_2 221 240 - -
Gso9g0520 355 SMART LRR_bac_2 173 192 - -
Gso9g0520 355 SMART LRR_bac_2 103 122 - -
Gso9g0520 355 SMART LRR_bac_2 80 99 - -
Gso9g0520 355 SMART LRR_bac_2 126 145 - -
Gso9g0520 355 SMART LRR_bac_2 150 169 - -
Gso9g0520 355 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Gso9g0520 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 346 - -
Gso9g0520 355 Pfam Leucine rich repeat 221 257 IPR001611 GO:0005515
Gso9g0520 355 Pfam Leucine rich repeat 61 114 IPR001611 GO:0005515
Gso9g0520 355 Gene3D Ribonuclease Inhibitor 4 208 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0520 Gso-Chr9 5749080 5753380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0520 44 292 Receptor kinase-like Gene Family AT5G51350 30.798 5.35e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0520 - - gmx:100776295 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1378 15 14897403 14901896 Gso9g0520 9 5749080 5753380 GST