Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1378 ATGAATATGTACCAATTGCAACAGTTTCATATTCAACCCATGATGAAGATGGATAACACGATGAGGAAGAGGGAGAGAAGCAAAGCCATGGAGAAAGAGAGGCTTCAAGTGATGGACTTGAGTGGCATGTCCTTGGAGTTTCTTCCCAAACCTTCGCTTGATTTAGCCACCATTTGCAAGTTGGACCTATCTAATAACAATCTCCAGGAAATTCCGGAATCCTTAACGGCTAGACTTCTAAACGTGGAAGTGTTGGACGTGCGTTCCAACCAGCTAAACTCCCTTCCCAATTCCATTGGCTGCCTCTCTAAGCTCAAGGTTTTGAATGTCTCAGGCAACTTCCTCGAATCCCTCCCCAAAACCATTGAGAATTGCAGAGCCTTAGAAGAGCTGAATGCAAACTTCAACAAGCTGAGCAAGCTGCCAGACACAATAGGGTTTGAGCTCATAAACCTAAAGAAGCTCTCAGTGAACTCCAACAAGCTTGTGTTTCTTCCAAGCTCCACTTCACACTTAACAGCTTTGAAGGTTCTTGATGCACGATTGAATTGCCTAAGGGCACTTCCTGAGGACCTTGAGAACCTCATCAACCTAGAGACCCTTAATGTGAGCCAGAACTTCCAGTATTTGGAGACCATCCCTTACTCCATAGGGCTTCTCTGGTCACTTGTTGAACTTGATGTTAGCTACAATAACATCAAGACCTTGCCTGAGTCAATTGGGTGCCTCAAGAATCTCCAGAAGCTGAGTGTTGAAGGGAACCCTCTTACCTGTCCCCCTATGGAGGTGGTGGAACAAGGACTTCATGTGGTGATGGAGTACATGCATCATAAGATTAACTCAAGTGATCAAAACAAAACTAAGAAAAGGTGGTGGATGGGGAAGATTGTGAAATGTGGAACCTTCAATAAACAATTTAGAAATGGGAAACGACCTGAACATGTGGGTTACAACATGCTTAAGCACCAGAATATCAATGGTCTTGCTTCCCCAGGCTTCATGGGGATGCTCTCCCCTCTTCGCCTGTTCTCTCCCCATCGTTCCCCCCGCCATTTCTTCAGTTGA 1065 0.4526 MNMYQLQQFHIQPMMKMDNTMRKRERSKAMEKERLQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLNSLPNSIGCLSKLKVLNVSGNFLESLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETIPYSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEYMHHKINSSDQNKTKKRWWMGKIVKCGTFNKQFRNGKRPEHVGYNMLKHQNINGLASPGFMGMLSPLRLFSPHRSPRHFFS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1378 354 Pfam Leucine rich repeat 60 113 IPR001611 GO:0005515
Gso15g1378 354 Gene3D Ribonuclease Inhibitor 143 278 IPR032675 -
Gso15g1378 354 Gene3D Ribonuclease Inhibitor 2 142 IPR032675 -
Gso15g1378 354 ProSiteProfiles Leucine-rich repeat profile. 57 78 IPR001611 GO:0005515
Gso15g1378 354 SMART LRR_typ_2 149 171 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 220 243 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 102 125 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 172 195 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 79 101 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 55 78 IPR003591 -
Gso15g1378 354 SMART LRR_typ_2 126 148 IPR003591 -
Gso15g1378 354 SMART LRR_bac_2 79 98 - -
Gso15g1378 354 SMART LRR_bac_2 172 191 - -
Gso15g1378 354 SMART LRR_bac_2 55 74 - -
Gso15g1378 354 SMART LRR_bac_2 149 168 - -
Gso15g1378 354 SMART LRR_bac_2 102 121 - -
Gso15g1378 354 SMART LRR_bac_2 125 144 - -
Gso15g1378 354 SMART LRR_bac_2 220 239 - -
Gso15g1378 354 SUPERFAMILY L domain-like 33 259 - -
Gso15g1378 354 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 345 - -
Gso15g1378 354 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Gso15g1378 354 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1378 Gso-Chr15 14897403 14901896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1378 43 339 Receptor kinase-like Gene Family AT5G51350 30.547 7.06e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1378 - - gmx:100775711 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1378 15 14897403 14901896 Gso9g0520 9 5749080 5753380 GST